Annotation Detail for OSMR
Basic Information Top
| Gene Symbol: | OSMR ( MGC150626,MGC150627,MGC75127,OSMRB ) |
|---|---|
| Gene Full Name: | oncostatin M receptor |
| Band: | 5p13.1 |
| Quick Links | Entrez ID:9180; OMIM: 601743; Uniprot ID:OSMR_HUMAN; ENSEMBL ID: ENSG00000145623; HGNC ID: 8507 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.120658
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 2 / 62319 | 32 | |
| fetus | 21 / 564012 | 37 | |
| neonate | 1 / 31097 | 32 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 5 / 55556 | 89 |  |
| adult | 103 / 1939121 | 53 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 6 / 94178 | 63 | |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 12 / 82823 | 144 | |
| colorectal tumor | 1 / 114246 | 8 |  |
| esophageal tumor | 4 / 17290 | 231 |  |
| gastrointestinal tumor | 5 / 119369 | 41 | |
| germ cell tumor | 4 / 263845 | 15 | |
| glioma | 4 / 106883 | 37 | |
| head and neck tumor | 11 / 136302 | 80 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 6 / 96359 | 62 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 15 / 97250 | 154 | |
| normal | 119 / 3360307 | 35 | |
| ovarian tumor | 3 / 76682 | 39 | |
| pancreatic tumor | 9 / 104616 | 86 | |
| primitive neuroectodermal tumor of the CNS | 1 / 125680 | 7 | |
| prostate cancer | 4 / 102680 | 38 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 3 / 125191 | 23 | |
| uterine tumor | 3 / 90257 | 33 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 2 / 29757 | 67 | |
| blood | 0 / 123478 | 0 | |
| bone | 8 / 71655 | 111 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 25 / 1100989 | 22 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 27 / 149255 | 180 | |
| ear | 1 / 16212 | 61 | |
| embryonic tissue | 3 / 215722 | 13 | |
| esophagus | 5 / 20209 | 247 | |
| eye | 5 / 211054 | 23 | |
| heart | 2 / 89626 | 22 | |
| intestine | 1 / 234472 | 4 | |
| kidney | 9 / 211777 | 42 | |
| larynx | 7 / 24145 | 289 | |
| liver | 9 / 207743 | 43 | |
| lung | 8 / 336974 | 23 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 13 / 153271 | 84 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 3 / 107715 | 27 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 3 / 102051 | 29 | |
| pancreas | 19 / 214812 | 88 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 3 / 41328 | 72 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 18 / 280825 | 64 | |
| prostate | 8 / 189345 | 42 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 1 / 210574 | 4 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 6 / 96619 | 62 | |
| testis | 6 / 330442 | 18 | |
| thymus | 8 / 81131 | 98 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 13 / 52413 | 248 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 10 / 232878 | 42 | |
| vascular | 4 / 51780 | 77 | |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 205729_at
| Cell line | Expression level | Expression bar |
|---|---|---|
| ||
| 721_B_lymphoblasts | 7.5 | |
| Adipocyte | 9.3 | |
| AdrenalCortex | 7.6 | |
| Adrenalgland | 6.2 | |
| Amygdala | 6.4 | |
| Appendix | 6.95 | |
| AtrioventricularNode | 8.8 | |
| BDCA4+_DentriticCells | 6.25 | |
| Bonemarrow | 6.35 | |
| BronchialEpithelialCells | 6.6 | |
| CD105+_Endothelial | 6.3 | |
| CD14+_Monocytes | 6.65 | |
| CD19+_BCells(neg._sel.) | 6.7 | |
| CD33+_Myeloid | 8.1 | |
| CD34+ | 8 | |
| CD4+_Tcells | 6.65 | |
| CD56+_NKCells | 7.25 | |
| CD71+_EarlyErythroid | 5.95 | |
| CD8+_Tcells | 6.1 | |
| CardiacMyocytes | 58.5 | |
| Caudatenucleus | 5.7 | |
| Cerebellum | 5.15 | |
| CerebellumPeduncles | 7.4 | |
| CiliaryGanglion | 6.6 | |
| CingulateCortex | 6.45 | |
| Colorectaladenocarcinoma | 6.3 | |
| DorsalRootGanglion | 5.5 | |
| FetalThyroid | 6.15 | |
| Fetalbrain | 6.25 | |
| Fetalliver | 5.5 | |
| Fetallung | 6.1 | |
| GlobusPallidus | 4.7 | |
| Heart | 8.15 | |
| Hypothalamus | 6.9 | |
| Kidney | 5.4 | |
| Leukemia_chronicMyelogenousK-562 | 5.7 | |
| Leukemia_promyelocytic-HL-60 | 5.6 | |
| Leukemialymphoblastic(MOLT-4) | 5.1 | |
| Liver | 8.5 | |
| Lung | 6.95 | |
| Lymphnode | 5.45 | |
| Lymphoma_burkitts(Daudi) | 8.05 | |
| Lymphoma_burkitts(Raji) | 8.9 | |
| MedullaOblongata | 5.8 | |
| OccipitalLobe | 5.65 | |
| OlfactoryBulb | 4.9 | |
| Ovary | 9.25 | |
| Pancreas | 5.25 | |
| PancreaticIslet | 6.8 | |
| ParietalLobe | 7.05 | |
| Pituitary | 7.35 | |
| Placenta | 15.95 | |
| Pons | 6.15 | |
| PrefrontalCortex | 7.85 | |
| Prostate | 7.2 | |
| Salivarygland | 5.25 | |
| SkeletalMuscle | 8.45 | |
| Skin | 7.4 | |
| SmoothMuscle | 98.3 | |
| Spinalcord | 6.7 | |
| SubthalamicNucleus | 6 | |
| SuperiorCervicalGanglion | 12 | |
| TemporalLobe | 5.8 | |
| Testis | 5.4 | |
| TestisGermCell | 5.25 | |
| TestisIntersitial | 5.4 | |
| TestisLeydigCell | 6.3 | |
| TestisSeminiferousTubule | 5.4 | |
| Thalamus | 6.45 | |
| Thymus | 5 | |
| Thyroid | 7.65 | |
| Tongue | 6.45 | |
| Tonsil | 6.2 | |
| Trachea | 5.3 | |
| TrigeminalGanglion | 6.85 | |
| Uterus | 5.05 | |
| UterusCorpus | 5.7 | |
| WholeBlood | 6.85 | |
| Wholebrain | 5.15 | |
| colon | 6.4 | |
| pineal_day | 7.94 | |
| pineal_night | 7.72 | |
| retina | 7.675 | |
| small_intestine | 6.1 | |
- Probe name: A_23_P156289
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 2.43 ± 1.11 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 1.7 ± 0.49 | |
| Basal Part of Pons | 1.95 ± 0.7 | |
| Cerebellar Cortex | 1.74 ± 0.87 | |
| Cerebellar Nuclei | 2.37 ± 0.74 | |
| Claustrum | 2.59 ± 1.07 | |
| Epithalamus | 2.61 ± 0.74 | |
| Frontal Lobe | 1.98 ± 0.89 | |
| Globus Pallidus | 3.18 ± 0.67 | |
| Hypothalamus | 2.11 ± 0.8 | |
| Insula | 1.79 ± 0.81 | |
| Limbic Lobe | 2.09 ± 0.86 | |
| Mesencephalon | 2.27 ± 0.83 | |
| Myelencephalon | 2.22 ± 0.83 | |
| Occipital Lobe | 2.11 ± 0.81 | |
| Parietal Lobe | 2.16 ± 0.97 | |
| Pontine Tegmentum | 2.21 ± 0.94 | |
| Striatum | 2.68 ± 0.79 | |
| Subthalamus | 2.07 ± 0.38 | |
| Temporal Lobe | 2.06 ± 0.9 | |
| Thalamus | 2.16 ± 0.79 | |
| White Matter | 2.14 ± 0.59 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Osmr | CB | Cerebellum | 0.37 | |
| 0.61 | | |||
| Osmr | CTX | Cerebral cortex | 0.39 | |
| 0.45 | | |||
| Osmr | HIP | Hippocampal region | 0.96 | |
| 1.2 | | |||
| Osmr | HPF | Hippocampal formation | 0.87 | |
| 1.2 | | |||
| Osmr | HY | Hypothalamus | 0.11 | |
| 0.09 | | |||
| Osmr | LSX | Lateral septal complex | 0.12 | |
| 0.17 | | |||
| Osmr | MB | Midbrain | 0.34 | |
| 0.61 | | |||
| Osmr | MY | Medulla | 2.4 | |
| 2.89 | | |||
| Osmr | OLF | Olfactory bulb | 0.39 | |
| 0.83 | | |||
| Osmr | P | Pons | 0.19 | |
| 0.18 | | |||
| Osmr | PAL | Pallidum | 0.21 | |
| 0.4 | | |||
| Osmr | RHP | Retrohippocampal region | 0.79 | |
| 1.19 | | |||
| Osmr | sAMY | Striatum-like amygdalar nuclei | 0.68 | |
| 0.48 | | |||
| Osmr | STR | Striatum | 0.4 | |
| 0.47 | | |||
| Osmr | STRd | Striatum dorsal region | 0.5 | |
| 0.65 | | |||
| Osmr | STRv | Striatum ventral region | 0.05 | |
| 0.07 | | |||
| Osmr | TH | Thalamus | 0.49 | |
| 0.65 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| OSMR_HUMAN_0 | 0 | 0 | 0 | TYQSEVLAERLPLTPVSLK | PRIDE |