AutismKB 2.0

Annotation Detail for ZBED1


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Basic Information Top
Gene Symbol:ZBED1 ( ALTE,DREF,KIAA0785,TRAMP,hDREF )
Gene Full Name: zinc finger, BED-type containing 1
Band: Xp22.33 and Yp11
Quick LinksEntrez ID:9189; OMIM: 300178; Uniprot ID:ZBED1_HUMAN; ENSEMBL ID: ENSG00000214717; HGNC ID: 447
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Microarray in BioGPS Top
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  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 203043_at
Cell line Expression level Expression bar
721_B_lymphoblasts260.15
Adipocyte47.8
AdrenalCortex92.85
Adrenalgland108.5
Amygdala49.65
Appendix41.75
AtrioventricularNode11.45
BDCA4+_DentriticCells160.8
Bonemarrow45.6
BronchialEpithelialCells20.75
CD105+_Endothelial25.9
CD14+_Monocytes73.25
CD19+_BCells(neg._sel.)135.4
CD33+_Myeloid61.5
CD34+123.75
CD4+_Tcells48.75
CD56+_NKCells134.25
CD71+_EarlyErythroid8.5
CD8+_Tcells33.6
CardiacMyocytes19.45
Caudatenucleus39.9
Cerebellum41.55
CerebellumPeduncles54.4
CiliaryGanglion30.7
CingulateCortex41.85
Colorectaladenocarcinoma49.5
DorsalRootGanglion23.6
FetalThyroid46.85
Fetalbrain51.35
Fetalliver40.2
Fetallung44.9
GlobusPallidus23.35
Heart96.9
Hypothalamus58.85
Kidney75.3
Leukemia_chronicMyelogenousK-56234.55
Leukemia_promyelocytic-HL-6043.8
Leukemialymphoblastic(MOLT-4)23.95
Liver299.15
Lung65.15
Lymphnode36.15
Lymphoma_burkitts(Daudi)55.8
Lymphoma_burkitts(Raji)41.15
MedullaOblongata40.15
OccipitalLobe37.4
OlfactoryBulb37.1
Ovary27.35
Pancreas48.4
PancreaticIslet40.4
ParietalLobe37.45
Pituitary41.3
Placenta66.95
Pons44.35
PrefrontalCortex50.05
Prostate70.3
Salivarygland19.35
SkeletalMuscle51.5
Skin17.6
SmoothMuscle62.65
Spinalcord66.6
SubthalamicNucleus25.15
SuperiorCervicalGanglion36.05
TemporalLobe42
Testis47.15
TestisGermCell29.6
TestisIntersitial25.7
TestisLeydigCell31.1
TestisSeminiferousTubule35.3
Thalamus64.9
Thymus42.35
Thyroid71.1
Tongue32.2
Tonsil29.1
Trachea37.25
TrigeminalGanglion36.75
Uterus47.55
UterusCorpus17.95
WholeBlood71
Wholebrain43.65
colon46.15
pineal_day95.26
pineal_night101.18
retina128.525
small_intestine53.75
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_32_P86623
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala9.19 ± 0.26
Basal Forebrain9.47 ± 0.29
Basal Part of Pons9.28 ± 0.32
Cerebellar Cortex9.24 ± 0.25
Cerebellar Nuclei9.68 ± 0.27
Claustrum8.75 ± 0.3
Epithalamus9.61 ± 0.25
Frontal Lobe9.18 ± 0.34
Globus Pallidus10.32 ± 0.31
Hypothalamus9.3 ± 0.22
Insula9.07 ± 0.31
Limbic Lobe9.26 ± 0.42
Mesencephalon9.48 ± 0.46
Myelencephalon9.36 ± 0.26
Occipital Lobe9.71 ± 0.42
Parietal Lobe9.37 ± 0.27
Pontine Tegmentum9.41 ± 0.31
Striatum9.53 ± 0.34
Subthalamus9.64 ± 0.12
Temporal Lobe9.11 ± 0.31
Thalamus9.51 ± 0.26
White Matter9.87 ± 0.26
Mouse Brain ISH
Peptide Top

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  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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