AutismKB 2.0

Annotation Detail for ZMYM4


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:ZMYM4 ( CDIR,DKFZp686B09210,DKFZp686L0547,KIAA0425,MYM,ZNF198L3,ZNF262 )
Gene Full Name: zinc finger, MYM-type 4
Band: 1p34.3
Quick LinksEntrez ID:9202; OMIM: 613568; Uniprot ID:ZMYM4_HUMAN; ENSEMBL ID: ENSG00000146463; HGNC ID: 13055
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body2 / 7076128
blastocyst5 / 6231980
fetus40 / 56401270
neonate0 / 310970 
infant1 / 2362042
juvenile2 / 5555635
adult124 / 193912163
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor2 / 12794156
bladder carcinoma1 / 1747557
breast (mammary gland) tumor4 / 9417842
cervical tumor1 / 3436629
chondrosarcoma3 / 8282336
colorectal tumor2 / 11424617
esophageal tumor0 / 172900 
gastrointestinal tumor5 / 11936941
germ cell tumor30 / 263845113
glioma4 / 10688337
head and neck tumor9 / 13630266
kidney tumor5 / 6895972
leukemia1 / 9584210
liver tumor0 / 963590 
lung tumor4 / 10312738
lymphoma1 / 7175513
non-neoplasia3 / 9725030
normal186 / 336030755
ovarian tumor4 / 7668252
pancreatic tumor2 / 10461619
primitive neuroectodermal tumor of the CNS4 / 12568031
prostate cancer10 / 10268097
retinoblastoma2 / 4635643
skin tumor3 / 12494924
soft tissue/muscle tissue tumor8 / 12519163
uterine tumor11 / 90257121
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue3 / 13106228
adrenal gland2 / 3319760
ascites4 / 4001599
bladder3 / 29757100
blood1 / 1234788
bone4 / 7165555
bone marrow1 / 4880120
brain37 / 110098933
cervix2 / 4817141
connective tissue1 / 1492556
ear4 / 16212246
embryonic tissue14 / 21572264
esophagus0 / 202090 
eye6 / 21105428
heart2 / 8962622
intestine5 / 23447221
kidney12 / 21177756
larynx1 / 2414541
liver3 / 20774314
lung19 / 33697456
lymph0 / 442700 
lymph node8 / 9161087
mammary gland6 / 15327139
mouth1 / 6705214
muscle2 / 10771518
nerve2 / 15768126
ovary4 / 10205139
pancreas20 / 21481293
parathyroid0 / 205390 
pharynx1 / 4132824
pituitary gland1 / 1658560
placenta20 / 28082571
prostate15 / 18934579
salivary gland1 / 2015549
skin4 / 21057418
spleen2 / 5395237
stomach2 / 9661920
testis34 / 330442102
thymus5 / 8113161
thyroid6 / 47473126
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus28 / 232878120
vascular5 / 5178096
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 202049_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts26.05
Adipocyte6.8
AdrenalCortex8.15
Adrenalgland5.95
Amygdala6.8
Appendix7.35
AtrioventricularNode6.05
BDCA4+_DentriticCells11.55
Bonemarrow6.9
BronchialEpithelialCells6.8
CD105+_Endothelial6.8
CD14+_Monocytes8.2
CD19+_BCells(neg._sel.)7.1
CD33+_Myeloid11.5
CD34+21.7
CD4+_Tcells7.85
CD56+_NKCells8.3
CD71+_EarlyErythroid6.3
CD8+_Tcells7
CardiacMyocytes10.45
Caudatenucleus5.95
Cerebellum5.75
CerebellumPeduncles7.7
CiliaryGanglion5.7
CingulateCortex7.05
Colorectaladenocarcinoma6.35
DorsalRootGanglion5.25
FetalThyroid7.1
Fetalbrain6.9
Fetalliver6.1
Fetallung8.15
GlobusPallidus5.55
Heart9.5
Hypothalamus7.15
Kidney5.55
Leukemia_chronicMyelogenousK-5629
Leukemia_promyelocytic-HL-606.3
Leukemialymphoblastic(MOLT-4)8.1
Liver8.85
Lung7.4
Lymphnode5.95
Lymphoma_burkitts(Daudi)9.45
Lymphoma_burkitts(Raji)9.75
MedullaOblongata6.25
OccipitalLobe6.15
OlfactoryBulb5.6
Ovary5
Pancreas5.7
PancreaticIslet7.65
ParietalLobe7.7
Pituitary8.4
Placenta6.25
Pons6.7
PrefrontalCortex9.1
Prostate8.15
Salivarygland5.75
SkeletalMuscle9.2
Skin5.35
SmoothMuscle32.1
Spinalcord7.15
SubthalamicNucleus5.8
SuperiorCervicalGanglion8.7
TemporalLobe6.45
Testis8.25
TestisGermCell17.95
TestisIntersitial26.4
TestisLeydigCell8.05
TestisSeminiferousTubule23.2
Thalamus7.2
Thymus5.15
Thyroid8.15
Tongue6.85
Tonsil7
Trachea5.7
TrigeminalGanglion7.4
Uterus8.15
UterusCorpus6.6
WholeBlood7.8
Wholebrain5.2
colon7.2
pineal_day12.72
pineal_night15.92
retina8.4
small_intestine6.5
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_1586_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala8.06 ± 0.25
Basal Forebrain7.86 ± 0.17
Basal Part of Pons7.77 ± 0.26
Cerebellar Cortex7.8 ± 0.36
Cerebellar Nuclei7.74 ± 0.28
Claustrum7.86 ± 0.47
Epithalamus7.75 ± 0.38
Frontal Lobe7.69 ± 0.29
Globus Pallidus7.65 ± 0.18
Hypothalamus7.78 ± 0.26
Insula7.62 ± 0.2
Limbic Lobe7.9 ± 0.33
Mesencephalon7.83 ± 0.36
Myelencephalon7.77 ± 0.26
Occipital Lobe8.13 ± 0.29
Parietal Lobe7.85 ± 0.28
Pontine Tegmentum7.81 ± 0.31
Striatum7.88 ± 0.27
Subthalamus7.53 ± 0.17
Temporal Lobe7.75 ± 0.29
Thalamus7.83 ± 0.25
White Matter7.67 ± 0.3
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Zmym4CBCerebellum19.35
20.42
Zmym4CTXCerebral cortex16.83
12.77
Zmym4HIPHippocampal region26.13
31.65
Zmym4HPFHippocampal formation21.65
23.12
Zmym4HYHypothalamus9.65
7.73
Zmym4LSXLateral septal complex3.14
2.49
Zmym4MBMidbrain6.5
6.01
Zmym4MYMedulla12.49
11.99
Zmym4OLFOlfactory bulb23.2
18.54
Zmym4PPons8.11
7.9
Zmym4PALPallidum5.92
5.36
Zmym4RHPRetrohippocampal region14.37
11.61
Zmym4sAMYStriatum-like amygdalar nuclei8.89
6.7
Zmym4STRStriatum6.28
4.97
Zmym4STRdStriatum dorsal region5.23
4.27
Zmym4STRvStriatum ventral region9.58
6.99
Zmym4THThalamus6.14
5.36
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00042469 22 1244 1265 SDPLGSTQDHALSQESSEPGCR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved