Annotation Detail for MEX3A
Basic Information Top
| Gene Symbol: | MEX3A ( MEX-3A,RKHD4 ) |
|---|---|
| Gene Full Name: | mex-3 homolog A (C. elegans) |
| Band: | 1q22 |
| Quick Links | Entrez ID:92312; OMIM: 611007; Uniprot ID:MEX3A_HUMAN; ENSEMBL ID: ; HGNC ID: 33482 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.591496
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 9 / 70761 | 127 |  |
| blastocyst | 6 / 62319 | 96 | |
| fetus | 49 / 564012 | 86 | |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 |  |
| juvenile | 0 / 55556 | 0 | |
| adult | 23 / 1939121 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 2 / 114246 | 17 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 15 / 263845 | 56 | |
| glioma | 9 / 106883 | 84 | |
| head and neck tumor | 1 / 136302 | 7 |  |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 3 / 96359 | 31 | |
| lung tumor | 8 / 103127 | 77 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 95 / 3360307 | 28 | |
| ovarian tumor | 6 / 76682 | 78 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 3 / 125680 | 23 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 11 / 46356 | 237 |  |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 5 / 125191 | 39 | |
| uterine tumor | 4 / 90257 | 44 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 39 / 1100989 | 35 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 21 / 215722 | 97 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 25 / 211054 | 118 | |
| heart | 3 / 89626 | 33 | |
| intestine | 6 / 234472 | 25 | |
| kidney | 2 / 211777 | 9 | |
| larynx | 0 / 24145 | 0 | |
| liver | 4 / 207743 | 19 | |
| lung | 14 / 336974 | 41 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 3 / 153271 | 19 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 6 / 102051 | 58 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 4 / 280825 | 14 | |
| prostate | 2 / 189345 | 10 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 4 / 210574 | 18 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 8 / 330442 | 24 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 9 / 232878 | 38 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_24_P857404
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.49 ± 0.34 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.81 ± 0.24 | |
| Basal Part of Pons | 4.39 ± 0.4 | |
| Cerebellar Cortex | 4.79 ± 0.35 | |
| Cerebellar Nuclei | 4.7 ± 0.33 | |
| Claustrum | 4.04 ± 0.63 | |
| Epithalamus | 4.99 ± 0.39 | |
| Frontal Lobe | 4.44 ± 0.46 | |
| Globus Pallidus | 4.92 ± 0.36 | |
| Hypothalamus | 4.29 ± 0.57 | |
| Insula | 4.43 ± 0.39 | |
| Limbic Lobe | 4.54 ± 0.52 | |
| Mesencephalon | 4.43 ± 0.47 | |
| Myelencephalon | 4.54 ± 0.5 | |
| Occipital Lobe | 4.46 ± 0.44 | |
| Parietal Lobe | 4.34 ± 0.51 | |
| Pontine Tegmentum | 4.45 ± 0.48 | |
| Striatum | 4.72 ± 0.48 | |
| Subthalamus | 3.91 ± 0.47 | |
| Temporal Lobe | 4.4 ± 0.47 | |
| Thalamus | 4.7 ± 0.44 | |
| White Matter | 5.25 ± 0.12 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| 2700083E18Rik | CB | Cerebellum | 9.34 | |
| 12 | | |||
| 2700083E18Rik | CTX | Cerebral cortex | 5.67 | |
| 4.18 | | |||
| 2700083E18Rik | HIP | Hippocampal region | 5.18 | |
| 5.14 | | |||
| 2700083E18Rik | HPF | Hippocampal formation | 5.26 | |
| 4.78 | | |||
| 2700083E18Rik | HY | Hypothalamus | 1.13 | |
| 1 | | |||
| 2700083E18Rik | LSX | Lateral septal complex | 1.27 | |
| 1.17 | | |||
| 2700083E18Rik | MB | Midbrain | 1.91 | |
| 2.76 | | |||
| 2700083E18Rik | MY | Medulla | 4.14 | |
| 4.32 | | |||
| 2700083E18Rik | OLF | Olfactory bulb | 7.77 | |
| 5.63 | | |||
| 2700083E18Rik | P | Pons | 2.77 | |
| 4.2 | | |||
| 2700083E18Rik | PAL | Pallidum | 0.14 | |
| 0.13 | | |||
| 2700083E18Rik | RHP | Retrohippocampal region | 5.65 | |
| 4.47 | | |||
| 2700083E18Rik | sAMY | Striatum-like amygdalar nuclei | 0.6 | |
| 0.68 | | |||
| 2700083E18Rik | STR | Striatum | 2.29 | |
| 1.9 | | |||
| 2700083E18Rik | STRd | Striatum dorsal region | 2.69 | |
| 2.22 | | |||
| 2700083E18Rik | STRv | Striatum ventral region | 1.64 | |
| 1.03 | | |||
| 2700083E18Rik | TH | Thalamus | 0.85 | |
| 1 | |