Annotation Detail for WDR85
Basic Information Top
| Gene Symbol: | WDR85 ( C9orf112,FLJ90634,RP11-48C7.3 ) |
|---|---|
| Gene Full Name: | WD repeat domain 85 |
| Band: | 9q34.3 |
| Quick Links | Entrez ID:92715; OMIM: 613210; Uniprot ID:WDR85_HUMAN; ENSEMBL ID: ENSG00000148399; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.292570
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 2 / 62319 | 32 |  |
| fetus | 10 / 564012 | 17 | |
| neonate | 1 / 31097 | 32 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 4 / 55556 | 71 |  |
| adult | 99 / 1939121 | 51 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 11 / 82823 | 132 | |
| colorectal tumor | 4 / 114246 | 35 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 10 / 119369 | 83 | |
| germ cell tumor | 8 / 263845 | 30 | |
| glioma | 6 / 106883 | 56 | |
| head and neck tumor | 1 / 136302 | 7 |  |
| kidney tumor | 4 / 68959 | 58 | |
| leukemia | 3 / 95842 | 31 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 12 / 103127 | 116 | |
| lymphoma | 4 / 71755 | 55 | |
| non-neoplasia | 6 / 97250 | 61 | |
| normal | 126 / 3360307 | 37 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 6 / 104616 | 57 | |
| primitive neuroectodermal tumor of the CNS | 21 / 125680 | 167 | |
| prostate cancer | 5 / 102680 | 48 | |
| retinoblastoma | 2 / 46356 | 43 | |
| skin tumor | 3 / 124949 | 24 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 6 / 90257 | 66 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 8 / 40015 | 199 | |
| bladder | 3 / 29757 | 100 | |
| blood | 3 / 123478 | 24 | |
| bone | 11 / 71655 | 153 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 47 / 1100989 | 42 | |
| cervix | 3 / 48171 | 62 | |
| connective tissue | 6 / 149255 | 40 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 5 / 215722 | 23 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 6 / 211054 | 28 | |
| heart | 1 / 89626 | 11 | |
| intestine | 15 / 234472 | 63 | |
| kidney | 5 / 211777 | 23 | |
| larynx | 1 / 24145 | 41 | |
| liver | 3 / 207743 | 14 | |
| lung | 21 / 336974 | 62 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 5 / 153271 | 32 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 2 / 102051 | 19 | |
| pancreas | 9 / 214812 | 41 | |
| parathyroid | 2 / 20539 | 97 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 13 / 280825 | 46 | |
| prostate | 12 / 189345 | 63 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 3 / 210574 | 14 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 3 / 96619 | 31 | |
| testis | 20 / 330442 | 60 | |
| thymus | 7 / 81131 | 86 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 1 / 13680 | 73 | |
| uterus | 10 / 232878 | 42 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_23_P329016
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.37 ± 0.65 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 5.08 ± 0.23 | |
| Basal Part of Pons | 4.9 ± 0.45 | |
| Cerebellar Cortex | 5.03 ± 0.45 | |
| Cerebellar Nuclei | 4.59 ± 0.38 | |
| Claustrum | 5.31 ± 0.62 | |
| Epithalamus | 4.79 ± 0.33 | |
| Frontal Lobe | 4.78 ± 0.47 | |
| Globus Pallidus | 5.51 ± 0.25 | |
| Hypothalamus | 4.44 ± 0.57 | |
| Insula | 4.78 ± 0.58 | |
| Limbic Lobe | 5.19 ± 0.61 | |
| Mesencephalon | 4.8 ± 0.57 | |
| Myelencephalon | 5.03 ± 0.59 | |
| Occipital Lobe | 5.49 ± 0.59 | |
| Parietal Lobe | 5.02 ± 0.46 | |
| Pontine Tegmentum | 5.08 ± 0.56 | |
| Striatum | 5.33 ± 0.64 | |
| Subthalamus | 4.26 ± 0.09 | |
| Temporal Lobe | 4.92 ± 0.47 | |
| Thalamus | 5.19 ± 0.55 | |
| White Matter | 6.08 ± 0.41 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Wdr85 | CB | Cerebellum | 9.81 | |
| 13 | | |||
| Wdr85 | CTX | Cerebral cortex | 25.6 | |
| 21.11 | | |||
| Wdr85 | HIP | Hippocampal region | 29.89 | |
| 35.99 | | |||
| Wdr85 | HPF | Hippocampal formation | 34.62 | |
| 36.7 | | |||
| Wdr85 | HY | Hypothalamus | 17.45 | |
| 14.64 | | |||
| Wdr85 | LSX | Lateral septal complex | 1.64 | |
| 1.28 | | |||
| Wdr85 | MB | Midbrain | 7.8 | |
| 7.68 | | |||
| Wdr85 | MY | Medulla | 19.31 | |
| 22.71 | | |||
| Wdr85 | OLF | Olfactory bulb | 41.81 | |
| 36.6 | | |||
| Wdr85 | P | Pons | 22.83 | |
| 25.97 | | |||
| Wdr85 | PAL | Pallidum | 11.39 | |
| 11.71 | | |||
| Wdr85 | RHP | Retrohippocampal region | 45.87 | |
| 40.6 | | |||
| Wdr85 | sAMY | Striatum-like amygdalar nuclei | 15.42 | |
| 11.77 | | |||
| Wdr85 | STR | Striatum | 10.37 | |
| 8.05 | | |||
| Wdr85 | STRd | Striatum dorsal region | 7.37 | |
| 5.67 | | |||
| Wdr85 | STRv | Striatum ventral region | 19.57 | |
| 14.58 | | |||
| Wdr85 | TH | Thalamus | 13.21 | |
| 11.4 | |