Annotation Detail for DNER
Basic Information Top
| Gene Symbol: | DNER ( UNQ26,bet ) |
|---|---|
| Gene Full Name: | delta/notch-like EGF repeat containing |
| Band: | 2q36.3 |
| Quick Links | Entrez ID:92737; OMIM: 607299; Uniprot ID:DNER_HUMAN; ENSEMBL ID: ENSG00000187957; HGNC ID: 24456 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.234074
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 28 / 564012 | 49 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 42 / 1939121 | 21 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 5 / 34366 | 145 |  |
| chondrosarcoma | 6 / 82823 | 72 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 12 / 263845 | 45 | |
| glioma | 23 / 106883 | 215 |  |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 3 / 68959 | 43 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 1 / 96359 | 10 |  |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 5 / 97250 | 51 | |
| normal | 118 / 3360307 | 35 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 4 / 125191 | 31 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 5 / 71655 | 69 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 144 / 1100989 | 130 | |
| cervix | 5 / 48171 | 103 | |
| connective tissue | 5 / 149255 | 33 | |
| ear | 5 / 16212 | 308 | |
| embryonic tissue | 0 / 215722 | 0 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 10 / 211054 | 47 | |
| heart | 0 / 89626 | 0 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 7 / 211777 | 33 | |
| larynx | 1 / 24145 | 41 | |
| liver | 1 / 207743 | 4 | |
| lung | 2 / 336974 | 5 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 1 / 91610 | 10 | |
| mammary gland | 3 / 153271 | 19 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 1 / 214812 | 4 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 4 / 16585 | 241 | |
| placenta | 2 / 280825 | 7 | |
| prostate | 0 / 189345 | 0 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 1 / 330442 | 3 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 4 / 232878 | 17 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_618_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.74 ± 0.39 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 5.99 ± 0.34 | |
| Basal Part of Pons | 6.07 ± 0.4 | |
| Cerebellar Cortex | 6.4 ± 0.23 | |
| Cerebellar Nuclei | 6.43 ± 0.4 | |
| Claustrum | 5.52 ± 0.6 | |
| Epithalamus | 6.38 ± 0.39 | |
| Frontal Lobe | 5.96 ± 0.47 | |
| Globus Pallidus | 6.95 ± 0.62 | |
| Hypothalamus | 6.38 ± 0.39 | |
| Insula | 5.88 ± 0.34 | |
| Limbic Lobe | 5.7 ± 0.54 | |
| Mesencephalon | 6.2 ± 0.39 | |
| Myelencephalon | 6.06 ± 0.39 | |
| Occipital Lobe | 5.83 ± 0.47 | |
| Parietal Lobe | 5.96 ± 0.44 | |
| Pontine Tegmentum | 6.04 ± 0.46 | |
| Striatum | 5.53 ± 0.63 | |
| Subthalamus | 6.04 ± 0.5 | |
| Temporal Lobe | 5.98 ± 0.4 | |
| Thalamus | 6.55 ± 0.37 | |
| White Matter | 7.46 ± 0.28 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Dner | CB | Cerebellum | 58.56 | |
| 100 | | |||
| Dner | CTX | Cerebral cortex | 79.86 | |
| 77.01 | | |||
| Dner | HIP | Hippocampal region | 65.87 | |
| 87.27 | | |||
| Dner | HPF | Hippocampal formation | 85.59 | |
| 99.14 | | |||
| Dner | HY | Hypothalamus | 100 | |
| 100 | | |||
| Dner | LSX | Lateral septal complex | 100 | |
| 100 | | |||
| Dner | MB | Midbrain | 89.11 | |
| 89.03 | | |||
| Dner | MY | Medulla | 90.03 | |
| 100 | | |||
| Dner | OLF | Olfactory bulb | 100 | |
| 100 | | |||
| Dner | P | Pons | 85.95 | |
| 95.65 | | |||
| Dner | PAL | Pallidum | 92.55 | |
| 98.69 | | |||
| Dner | RHP | Retrohippocampal region | 100 | |
| 100 | | |||
| Dner | sAMY | Striatum-like amygdalar nuclei | 100 | |
| 100 | | |||
| Dner | STR | Striatum | 51.06 | |
| 47.25 | | |||
| Dner | STRd | Striatum dorsal region | 22.09 | |
| 24.08 | | |||
| Dner | STRv | Striatum ventral region | 59.88 | |
| 54.46 | | |||
| Dner | TH | Thalamus | 67.96 | |
| 62.09 | |