AutismKB 2.0

Annotation Detail for BCL7C


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Basic Information Top
Gene Symbol:BCL7C ( - )
Gene Full Name: B-cell CLL/lymphoma 7C
Band: 16p11.2
Quick LinksEntrez ID:9274; OMIM: 605847; Uniprot ID:BCL7C_HUMAN; ENSEMBL ID: ENSG00000099385; HGNC ID: 1006
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body3 / 7076142
blastocyst0 / 623190 
fetus2 / 5640123
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult29 / 193912114
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor1 / 9417810
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor1 / 1142468
esophageal tumor0 / 172900 
gastrointestinal tumor4 / 11936933
germ cell tumor1 / 2638453
glioma5 / 10688346
head and neck tumor2 / 13630214
kidney tumor1 / 6895914
leukemia1 / 9584210
liver tumor0 / 963590 
lung tumor4 / 10312738
lymphoma2 / 7175527
non-neoplasia2 / 9725020
normal50 / 336030714
ovarian tumor2 / 7668226
pancreatic tumor2 / 10461619
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer2 / 10268019
retinoblastoma0 / 463560 
skin tumor5 / 12494940
soft tissue/muscle tissue tumor8 / 12519163
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites1 / 4001524
bladder0 / 297570 
blood0 / 1234780 
bone1 / 7165513
bone marrow1 / 4880120
brain13 / 110098911
cervix0 / 481710 
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue3 / 21572213
esophagus0 / 202090 
eye10 / 21105447
heart1 / 8962611
intestine8 / 23447234
kidney3 / 21177714
larynx0 / 241450 
liver0 / 2077430 
lung8 / 33697423
lymph2 / 4427045
lymph node0 / 916100 
mammary gland2 / 15327113
mouth2 / 6705229
muscle1 / 1077159
nerve1 / 1576863
ovary4 / 10205139
pancreas8 / 21481237
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta2 / 2808257
prostate3 / 18934515
salivary gland1 / 2015549
skin6 / 21057428
spleen0 / 539520 
stomach2 / 9661920
testis5 / 33044215
thymus0 / 811310 
thyroid0 / 474730 
tonsil1 / 1699958
trachea0 / 524130 
umbilical cord0 / 136800 
uterus9 / 23287838
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 219072_at
Cell line Expression level Expression bar
721_B_lymphoblasts54.1
Adipocyte74.9
AdrenalCortex38.1
Adrenalgland38.15
Amygdala46.1
Appendix36.4
AtrioventricularNode31.7
BDCA4+_DentriticCells58.65
Bonemarrow44.4
BronchialEpithelialCells46.55
CD105+_Endothelial32.75
CD14+_Monocytes46.7
CD19+_BCells(neg._sel.)72.25
CD33+_Myeloid57.55
CD34+57.75
CD4+_Tcells70.55
CD56+_NKCells175.4
CD71+_EarlyErythroid49.05
CD8+_Tcells43.9
CardiacMyocytes61.1
Caudatenucleus54.1
Cerebellum46.5
CerebellumPeduncles89
CiliaryGanglion36.7
CingulateCortex44.9
Colorectaladenocarcinoma43.75
DorsalRootGanglion30.65
FetalThyroid41.8
Fetalbrain44.4
Fetalliver39.8
Fetallung36.6
GlobusPallidus30.25
Heart96.05
Hypothalamus48.85
Kidney69.75
Leukemia_chronicMyelogenousK-56239.05
Leukemia_promyelocytic-HL-6037.4
Leukemialymphoblastic(MOLT-4)56.6
Liver88.3
Lung89.1
Lymphnode45.35
Lymphoma_burkitts(Daudi)53.55
Lymphoma_burkitts(Raji)33.35
MedullaOblongata44.75
OccipitalLobe39.15
OlfactoryBulb37
Ovary28.2
Pancreas43.7
PancreaticIslet45.9
ParietalLobe47
Pituitary56.15
Placenta44.5
Pons40.7
PrefrontalCortex42.35
Prostate112.15
Salivarygland25.65
SkeletalMuscle47.2
Skin31.3
SmoothMuscle61
Spinalcord75.2
SubthalamicNucleus38.5
SuperiorCervicalGanglion39.3
TemporalLobe38.95
Testis58.05
TestisGermCell35.2
TestisIntersitial49.65
TestisLeydigCell42.4
TestisSeminiferousTubule46.2
Thalamus71.4
Thymus37.35
Thyroid103.4
Tongue34.2
Tonsil51.95
Trachea35.75
TrigeminalGanglion40.75
Uterus50.1
UterusCorpus28.1
WholeBlood47.95
Wholebrain39.15
colon42.45
pineal_day35.02
pineal_night31.34
retina53.275
small_intestine39.4
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_15269_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala6.13 ± 0.37
Basal Forebrain6.16 ± 0.16
Basal Part of Pons6.23 ± 0.28
Cerebellar Cortex6.14 ± 0.29
Cerebellar Nuclei5.88 ± 0.41
Claustrum6.3 ± 0.26
Epithalamus5.94 ± 0.46
Frontal Lobe6.08 ± 0.35
Globus Pallidus6.65 ± 0.2
Hypothalamus6.12 ± 0.33
Insula6.1 ± 0.2
Limbic Lobe6.15 ± 0.38
Mesencephalon6.12 ± 0.37
Myelencephalon6.14 ± 0.35
Occipital Lobe6.12 ± 0.39
Parietal Lobe6.05 ± 0.42
Pontine Tegmentum6.07 ± 0.32
Striatum6.41 ± 0.3
Subthalamus6.24 ± 0.05
Temporal Lobe6.01 ± 0.35
Thalamus6.16 ± 0.26
White Matter6.43 ± 0.24
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00427749 18 148 165 DPGGITAGSTDEPPMLTK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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