Annotation Detail for HNRPLL
Basic Information Top
| Gene Symbol: | HNRPLL ( SRRF,hnRNPLL ) |
|---|---|
| Gene Full Name: | heterogeneous nuclear ribonucleoprotein L-like |
| Band: | 2p22.1 |
| Quick Links | Entrez ID:92906; OMIM: 611208; Uniprot ID:HNRLL_HUMAN; ENSEMBL ID: ENSG00000143889; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.445497
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 4 / 70761 | 56 |  |
| blastocyst | 3 / 62319 | 48 |  |
| fetus | 30 / 564012 | 53 | |
| neonate | 3 / 31097 | 96 | |
| infant | 2 / 23620 | 84 | |
| juvenile | 4 / 55556 | 71 | |
| adult | 84 / 1939121 | 43 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 3 / 17475 | 171 | |
| breast (mammary gland) tumor | 5 / 94178 | 53 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 3 / 82823 | 36 | |
| colorectal tumor | 4 / 114246 | 35 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 7 / 119369 | 58 | |
| germ cell tumor | 27 / 263845 | 102 | |
| glioma | 9 / 106883 | 84 | |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 4 / 68959 | 58 | |
| leukemia | 1 / 95842 | 10 |  |
| liver tumor | 3 / 96359 | 31 | |
| lung tumor | 3 / 103127 | 29 | |
| lymphoma | 2 / 71755 | 27 | |
| non-neoplasia | 3 / 97250 | 30 | |
| normal | 158 / 3360307 | 47 | |
| ovarian tumor | 3 / 76682 | 39 | |
| pancreatic tumor | 4 / 104616 | 38 | |
| primitive neuroectodermal tumor of the CNS | 8 / 125680 | 63 | |
| prostate cancer | 1 / 102680 | 9 | |
| retinoblastoma | 2 / 46356 | 43 | |
| skin tumor | 3 / 124949 | 24 | |
| soft tissue/muscle tissue tumor | 4 / 125191 | 31 | |
| uterine tumor | 6 / 90257 | 66 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 2 / 13106 | 152 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 2 / 40015 | 49 | |
| bladder | 5 / 29757 | 168 | |
| blood | 4 / 123478 | 32 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 2 / 48801 | 40 | |
| brain | 62 / 1100989 | 56 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 8 / 149255 | 53 | |
| ear | 2 / 16212 | 123 | |
| embryonic tissue | 10 / 215722 | 46 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 8 / 211054 | 37 | |
| heart | 0 / 89626 | 0 | |
| intestine | 9 / 234472 | 38 | |
| kidney | 10 / 211777 | 47 | |
| larynx | 0 / 24145 | 0 | |
| liver | 5 / 207743 | 24 | |
| lung | 14 / 336974 | 41 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 3 / 91610 | 32 | |
| mammary gland | 5 / 153271 | 32 | |
| mouth | 2 / 67052 | 29 | |
| muscle | 2 / 107715 | 18 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 3 / 102051 | 29 | |
| pancreas | 9 / 214812 | 41 | |
| parathyroid | 1 / 20539 | 48 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 21 / 280825 | 74 | |
| prostate | 5 / 189345 | 26 | |
| salivary gland | 1 / 20155 | 49 | |
| skin | 6 / 210574 | 28 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 7 / 96619 | 72 | |
| testis | 29 / 330442 | 87 | |
| thymus | 4 / 81131 | 49 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 2 / 52413 | 38 | |
| umbilical cord | 1 / 13680 | 73 | |
| uterus | 14 / 232878 | 60 | |
| vascular | 3 / 51780 | 57 | |
Microarray in - Probe name: A_24_P234214
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.84 ± 0.32 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7.5 ± 0.24 | |
| Basal Part of Pons | 7.63 ± 0.17 | |
| Cerebellar Cortex | 7.93 ± 0.28 | |
| Cerebellar Nuclei | 7.51 ± 0.27 | |
| Claustrum | 7.83 ± 0.25 | |
| Epithalamus | 7.87 ± 0.3 | |
| Frontal Lobe | 7.71 ± 0.35 | |
| Globus Pallidus | 7.39 ± 0.23 | |
| Hypothalamus | 7.56 ± 0.34 | |
| Insula | 7.84 ± 0.44 | |
| Limbic Lobe | 7.95 ± 0.36 | |
| Mesencephalon | 7.66 ± 0.32 | |
| Myelencephalon | 7.71 ± 0.34 | |
| Occipital Lobe | 7.91 ± 0.25 | |
| Parietal Lobe | 7.73 ± 0.35 | |
| Pontine Tegmentum | 7.71 ± 0.3 | |
| Striatum | 7.54 ± 0.3 | |
| Subthalamus | 7.65 ± 0.18 | |
| Temporal Lobe | 7.72 ± 0.28 | |
| Thalamus | 7.62 ± 0.32 | |
| White Matter | 7.99 ± 0.18 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Hnrpll | CB | Cerebellum | 17.82 | |
| 25.71 | | |||
| Hnrpll | CTX | Cerebral cortex | 21.23 | |
| 13.43 | | |||
| Hnrpll | HIP | Hippocampal region | 16.76 | |
| 16.24 | | |||
| Hnrpll | HPF | Hippocampal formation | 14.79 | |
| 12.76 | | |||
| Hnrpll | HY | Hypothalamus | 2.9 | |
| 2.16 | | |||
| Hnrpll | LSX | Lateral septal complex | 2.86 | |
| 2.06 | | |||
| Hnrpll | MB | Midbrain | 4.96 | |
| 4.09 | | |||
| Hnrpll | MY | Medulla | 5.92 | |
| 5.4 | | |||
| Hnrpll | OLF | Olfactory bulb | 20.94 | |
| 14.96 | | |||
| Hnrpll | P | Pons | 4.25 | |
| 5.27 | | |||
| Hnrpll | PAL | Pallidum | 3.14 | |
| 2.24 | | |||
| Hnrpll | RHP | Retrohippocampal region | 11.84 | |
| 8.43 | | |||
| Hnrpll | sAMY | Striatum-like amygdalar nuclei | 1.13 | |
| 0.79 | | |||
| Hnrpll | STR | Striatum | 5.49 | |
| 3.74 | | |||
| Hnrpll | STRd | Striatum dorsal region | 5.02 | |
| 3.53 | | |||
| Hnrpll | STRv | Striatum ventral region | 11.23 | |
| 6.93 | | |||
| Hnrpll | TH | Thalamus | 5.86 | |
| 4.48 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00002948 | 17 | 77 | 93 | GLCESVVEADLVEALEK | Peptide Atlas |