Annotation Detail for CD19
Basic Information Top
Gene Symbol: | CD19 ( B4,MGC12802 ) |
---|---|
Gene Full Name: | CD19 molecule |
Band: | 16p11.2 |
Quick Links | Entrez ID:930; OMIM: 107265; Uniprot ID:CD19_HUMAN; ENSEMBL ID: ENSG00000177455; HGNC ID: 1633 |
Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.652262
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
embryoid body | 0 / 70761 | 0 | |
blastocyst | 0 / 62319 | 0 | |
fetus | 1 / 564012 | 1 | |
neonate | 0 / 31097 | 0 | |
infant | 0 / 23620 | 0 | |
juvenile | 3 / 55556 | 53 | |
adult | 2 / 1939121 | 1 |
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
adrenal tumor | 0 / 12794 | 0 | |
bladder carcinoma | 0 / 17475 | 0 | |
breast (mammary gland) tumor | 0 / 94178 | 0 | |
cervical tumor | 0 / 34366 | 0 | |
chondrosarcoma | 0 / 82823 | 0 | |
colorectal tumor | 0 / 114246 | 0 | |
esophageal tumor | 0 / 17290 | 0 | |
gastrointestinal tumor | 1 / 119369 | 8 | |
germ cell tumor | 4 / 263845 | 15 | |
glioma | 0 / 106883 | 0 | |
head and neck tumor | 0 / 136302 | 0 | |
kidney tumor | 0 / 68959 | 0 | |
leukemia | 19 / 95842 | 198 | |
liver tumor | 0 / 96359 | 0 | |
lung tumor | 0 / 103127 | 0 | |
lymphoma | 10 / 71755 | 139 | |
non-neoplasia | 4 / 97250 | 41 | |
normal | 63 / 3360307 | 18 | |
ovarian tumor | 0 / 76682 | 0 | |
pancreatic tumor | 0 / 104616 | 0 | |
primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
prostate cancer | 0 / 102680 | 0 | |
retinoblastoma | 0 / 46356 | 0 | |
skin tumor | 0 / 124949 | 0 | |
soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
uterine tumor | 0 / 90257 | 0 |
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
adipose tissue | 0 / 13106 | 0 | |
adrenal gland | 0 / 33197 | 0 | |
ascites | 0 / 40015 | 0 | |
bladder | 0 / 29757 | 0 | |
blood | 1 / 123478 | 8 | |
bone | 0 / 71655 | 0 | |
bone marrow | 1 / 48801 | 20 | |
brain | 2 / 1100989 | 1 | |
cervix | 0 / 48171 | 0 | |
connective tissue | 4 / 149255 | 26 | |
ear | 0 / 16212 | 0 | |
embryonic tissue | 0 / 215722 | 0 | |
esophagus | 0 / 20209 | 0 | |
eye | 0 / 211054 | 0 | |
heart | 0 / 89626 | 0 | |
intestine | 3 / 234472 | 12 | |
kidney | 0 / 211777 | 0 | |
larynx | 0 / 24145 | 0 | |
liver | 0 / 207743 | 0 | |
lung | 1 / 336974 | 2 | |
lymph | 7 / 44270 | 158 | |
lymph node | 19 / 91610 | 207 | |
mammary gland | 0 / 153271 | 0 | |
mouth | 0 / 67052 | 0 | |
muscle | 0 / 107715 | 0 | |
nerve | 0 / 15768 | 0 | |
ovary | 0 / 102051 | 0 | |
pancreas | 0 / 214812 | 0 | |
parathyroid | 0 / 20539 | 0 | |
pharynx | 0 / 41328 | 0 | |
pituitary gland | 0 / 16585 | 0 | |
placenta | 0 / 280825 | 0 | |
prostate | 0 / 189345 | 0 | |
salivary gland | 0 / 20155 | 0 | |
skin | 0 / 210574 | 0 | |
spleen | 34 / 53952 | 630 | |
stomach | 1 / 96619 | 10 | |
testis | 2 / 330442 | 6 | |
thymus | 4 / 81131 | 49 | |
thyroid | 0 / 47473 | 0 | |
tonsil | 12 / 16999 | 705 | |
trachea | 0 / 52413 | 0 | |
umbilical cord | 0 / 13680 | 0 | |
uterus | 0 / 232878 | 0 | |
vascular | 0 / 51780 | 0 |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 206398_s_at
Cell line | Expression level | Expression bar |
---|---|---|
721_B_lymphoblasts | 339.5 | |
Adipocyte | 4.5 | |
AdrenalCortex | 4.8 | |
Adrenalgland | 3.9 | |
Amygdala | 4.35 | |
Appendix | 4.5 | |
AtrioventricularNode | 3.45 | |
BDCA4+_DentriticCells | 38.5 | |
Bonemarrow | 7.15 | |
BronchialEpithelialCells | 4.4 | |
CD105+_Endothelial | 4.65 | |
CD14+_Monocytes | 4.85 | |
CD19+_BCells(neg._sel.) | 1074.85 | |
CD33+_Myeloid | 5 | |
CD34+ | 5.85 | |
CD4+_Tcells | 4.95 | |
CD56+_NKCells | 5.6 | |
CD71+_EarlyErythroid | 4.25 | |
CD8+_Tcells | 4.2 | |
CardiacMyocytes | 5.55 | |
Caudatenucleus | 4.05 | |
Cerebellum | 3.7 | |
CerebellumPeduncles | 5 | |
CiliaryGanglion | 3.2 | |
CingulateCortex | 5.5 | |
Colorectaladenocarcinoma | 3.55 | |
DorsalRootGanglion | 3.45 | |
FetalThyroid | 4.4 | |
Fetalbrain | 4.55 | |
Fetalliver | 3.9 | |
Fetallung | 3.75 | |
GlobusPallidus | 3.35 | |
Heart | 20.95 | |
Hypothalamus | 4.95 | |
Kidney | 4.05 | |
Leukemia_chronicMyelogenousK-562 | 4.9 | |
Leukemia_promyelocytic-HL-60 | 214.7 | |
Leukemialymphoblastic(MOLT-4) | 3.5 | |
Liver | 6.15 | |
Lung | 4.9 | |
Lymphnode | 128.25 | |
Lymphoma_burkitts(Daudi) | 400.1 | |
Lymphoma_burkitts(Raji) | 489 | |
MedullaOblongata | 4.2 | |
OccipitalLobe | 4.05 | |
OlfactoryBulb | 3.65 | |
Ovary | 3 | |
Pancreas | 3.65 | |
PancreaticIslet | 4.5 | |
ParietalLobe | 4.8 | |
Pituitary | 5.3 | |
Placenta | 4.05 | |
Pons | 4.6 | |
PrefrontalCortex | 5.7 | |
Prostate | 5.3 | |
Salivarygland | 4.85 | |
SkeletalMuscle | 7.75 | |
Skin | 3.45 | |
SmoothMuscle | 5.1 | |
Spinalcord | 4.85 | |
SubthalamicNucleus | 4.1 | |
SuperiorCervicalGanglion | 5.05 | |
TemporalLobe | 4.15 | |
Testis | 4.75 | |
TestisGermCell | 3.9 | |
TestisIntersitial | 4.25 | |
TestisLeydigCell | 6.6 | |
TestisSeminiferousTubule | 6.35 | |
Thalamus | 4.6 | |
Thymus | 4.6 | |
Thyroid | 4.35 | |
Tongue | 5.6 | |
Tonsil | 299.3 | |
Trachea | 3.95 | |
TrigeminalGanglion | 5.05 | |
Uterus | 3.75 | |
UterusCorpus | 5.15 | |
WholeBlood | 5.05 | |
Wholebrain | 3.9 | |
colon | 4.6 | |
pineal_day | 5.08 | |
pineal_night | 4.76 | |
retina | 5 | |
small_intestine | 4.4 |
Human Whole Brain Microarrayview in Allen Brain Atlas
- Probe name: CUST_9454_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue | Expression(mean ± stddev) | Expression Bar |
---|---|---|
Amygdala | 2.56 ± 0.75 | |
Basal Forebrain | 1.86 ± 0.58 | |
Basal Part of Pons | 2.05 ± 0.68 | |
Cerebellar Cortex | 2.37 ± 0.61 | |
Cerebellar Nuclei | 2.14 ± 0.64 | |
Claustrum | 2.73 ± 0.79 | |
Epithalamus | 1.72 ± 0.59 | |
Frontal Lobe | 2.01 ± 0.82 | |
Globus Pallidus | 1.41 ± 1.1 | |
Hypothalamus | 1.89 ± 0.71 | |
Insula | 2.11 ± 0.76 | |
Limbic Lobe | 2.28 ± 0.72 | |
Mesencephalon | 2.27 ± 0.65 | |
Myelencephalon | 2.14 ± 0.63 | |
Occipital Lobe | 2.51 ± 0.69 | |
Parietal Lobe | 2.2 ± 0.73 | |
Pontine Tegmentum | 2.08 ± 0.75 | |
Striatum | 2.09 ± 0.69 | |
Subthalamus | 2.06 ± 0.75 | |
Temporal Lobe | 2.19 ± 0.77 | |
Thalamus | 1.99 ± 0.67 | |
White Matter | 1.94 ± 0.56 |
Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
---|---|---|---|---|
Cd19 | CB | Cerebellum | 1.17 | |
1.32 | ||||
Cd19 | CTX | Cerebral cortex | 3.08 | |
1.99 | ||||
Cd19 | HIP | Hippocampal region | 1.42 | |
1.18 | ||||
Cd19 | HPF | Hippocampal formation | 2.1 | |
1.62 | ||||
Cd19 | HY | Hypothalamus | 0.2 | |
0.16 | ||||
Cd19 | LSX | Lateral septal complex | 0.63 | |
0.46 | ||||
Cd19 | MB | Midbrain | 0.51 | |
0.63 | ||||
Cd19 | MY | Medulla | 0.67 | |
0.91 | ||||
Cd19 | OLF | Olfactory bulb | 4.55 | |
4.49 | ||||
Cd19 | P | Pons | 0.42 | |
0.54 | ||||
Cd19 | PAL | Pallidum | 0.67 | |
0.57 | ||||
Cd19 | RHP | Retrohippocampal region | 3.68 | |
2.53 | ||||
Cd19 | sAMY | Striatum-like amygdalar nuclei | 1.96 | |
1.32 | ||||
Cd19 | STR | Striatum | 1.34 | |
0.98 | ||||
Cd19 | STRd | Striatum dorsal region | 1.18 | |
0.76 | ||||
Cd19 | STRv | Striatum ventral region | 1.87 | |
1.79 | ||||
Cd19 | TH | Thalamus | 0.53 | |
0.53 |