AutismKB 2.0

Annotation Detail for TRIP12


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Basic Information Top
Gene Symbol:TRIP12 ( KIAA0045,MGC138849,MGC138850,ULF )
Gene Full Name: thyroid hormone receptor interactor 12
Band: 2q36.3
Quick LinksEntrez ID:9320; OMIM: 604506; Uniprot ID:TRIPC_HUMAN; ENSEMBL ID: ENSG00000153827; HGNC ID: 12306
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body8 / 70761113
blastocyst7 / 62319112
fetus67 / 564012118
neonate0 / 310970 
infant1 / 2362042
juvenile7 / 55556125
adult183 / 193912194
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor2 / 12794156
bladder carcinoma2 / 17475114
breast (mammary gland) tumor12 / 94178127
cervical tumor1 / 3436629
chondrosarcoma18 / 82823217
colorectal tumor8 / 11424670
esophageal tumor0 / 172900 
gastrointestinal tumor10 / 11936983
germ cell tumor22 / 26384583
glioma5 / 10688346
head and neck tumor11 / 13630280
kidney tumor10 / 68959145
leukemia5 / 9584252
liver tumor8 / 9635983
lung tumor3 / 10312729
lymphoma4 / 7175555
non-neoplasia6 / 9725061
normal280 / 336030783
ovarian tumor6 / 7668278
pancreatic tumor6 / 10461657
primitive neuroectodermal tumor of the CNS3 / 12568023
prostate cancer6 / 10268058
retinoblastoma4 / 4635686
skin tumor17 / 124949136
soft tissue/muscle tissue tumor17 / 125191135
uterine tumor7 / 9025777
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland4 / 33197120
ascites4 / 4001599
bladder8 / 29757268
blood6 / 12347848
bone14 / 71655195
bone marrow1 / 4880120
brain53 / 110098948
cervix1 / 4817120
connective tissue17 / 149255113
ear2 / 16212123
embryonic tissue22 / 215722101
esophagus0 / 202090 
eye18 / 21105485
heart12 / 89626133
intestine18 / 23447276
kidney19 / 21177789
larynx0 / 241450 
liver21 / 207743101
lung24 / 33697471
lymph0 / 442700 
lymph node27 / 91610294
mammary gland18 / 153271117
mouth4 / 6705259
muscle2 / 10771518
nerve2 / 15768126
ovary7 / 10205168
pancreas8 / 21481237
parathyroid3 / 20539146
pharynx1 / 4132824
pituitary gland0 / 165850 
placenta14 / 28082549
prostate11 / 18934558
salivary gland0 / 201550 
skin27 / 210574128
spleen3 / 5395255
stomach9 / 9661993
testis35 / 330442105
thymus10 / 81131123
thyroid8 / 47473168
tonsil0 / 169990 
trachea7 / 52413133
umbilical cord0 / 136800 
uterus27 / 232878115
vascular7 / 51780135
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 201546_at
Cell line Expression level Expression bar
721_B_lymphoblasts760.15
Adipocyte246.3
AdrenalCortex46.45
Adrenalgland54.65
Amygdala139.2
Appendix20.25
AtrioventricularNode17.3
BDCA4+_DentriticCells541.6
Bonemarrow121.6
BronchialEpithelialCells527.9
CD105+_Endothelial285.2
CD14+_Monocytes423.4
CD19+_BCells(neg._sel.)259.2
CD33+_Myeloid545.95
CD34+439.4
CD4+_Tcells450.4
CD56+_NKCells696.85
CD71+_EarlyErythroid362.6
CD8+_Tcells531.05
CardiacMyocytes186
Caudatenucleus78.3
Cerebellum10.2
CerebellumPeduncles26.95
CiliaryGanglion16.05
CingulateCortex101.1
Colorectaladenocarcinoma66
DorsalRootGanglion20.85
FetalThyroid111.75
Fetalbrain103.6
Fetalliver103.3
Fetallung171.05
GlobusPallidus37
Heart15.85
Hypothalamus237.1
Kidney31.75
Leukemia_chronicMyelogenousK-562267.25
Leukemia_promyelocytic-HL-60124.5
Leukemialymphoblastic(MOLT-4)219
Liver15.35
Lung32.2
Lymphnode174.85
Lymphoma_burkitts(Daudi)174.4
Lymphoma_burkitts(Raji)114
MedullaOblongata118.95
OccipitalLobe131.15
OlfactoryBulb193.95
Ovary67.25
Pancreas113.85
PancreaticIslet170.35
ParietalLobe107.9
Pituitary260.8
Placenta153.4
Pons20.55
PrefrontalCortex220.1
Prostate131.9
Salivarygland142.05
SkeletalMuscle33.45
Skin29.9
SmoothMuscle504.9
Spinalcord205.4
SubthalamicNucleus51.75
SuperiorCervicalGanglion10.15
TemporalLobe40.4
Testis419.15
TestisGermCell951.6
TestisIntersitial1337.1
TestisLeydigCell872.8
TestisSeminiferousTubule838.35
Thalamus107.7
Thymus171.9
Thyroid181.1
Tongue52.2
Tonsil231.2
Trachea72.35
TrigeminalGanglion9.45
Uterus84.4
UterusCorpus100.8
WholeBlood489.1
Wholebrain47.2
colon76.3
pineal_day181.3
pineal_night156.76
retina123.05
small_intestine53
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_32_P188178
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala7.44 ± 0.34
Basal Forebrain7.4 ± 0.16
Basal Part of Pons7.38 ± 0.28
Cerebellar Cortex7.2 ± 0.22
Cerebellar Nuclei7.49 ± 0.25
Claustrum7.61 ± 0.4
Epithalamus7.5 ± 0.27
Frontal Lobe7.37 ± 0.29
Globus Pallidus7.74 ± 0.12
Hypothalamus7.46 ± 0.31
Insula7.39 ± 0.16
Limbic Lobe7.49 ± 0.25
Mesencephalon7.54 ± 0.28
Myelencephalon7.45 ± 0.3
Occipital Lobe7.74 ± 0.26
Parietal Lobe7.5 ± 0.27
Pontine Tegmentum7.48 ± 0.31
Striatum7.75 ± 0.32
Subthalamus7.53 ± 0.22
Temporal Lobe7.34 ± 0.24
Thalamus7.49 ± 0.25
White Matter8.07 ± 0.11
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Trip12CBCerebellum74.89
100
Trip12CTXCerebral cortex100
100
Trip12HIPHippocampal region100
100
Trip12HPFHippocampal formation100
100
Trip12HYHypothalamus100
100
Trip12LSXLateral septal complex100
100
Trip12MBMidbrain100
100
Trip12MYMedulla100
100
Trip12OLFOlfactory bulb100
100
Trip12PPons89.26
100
Trip12PALPallidum86.16
100
Trip12RHPRetrohippocampal region100
100
Trip12sAMYStriatum-like amygdalar nuclei100
100
Trip12STRStriatum100
100
Trip12STRdStriatum dorsal region100
100
Trip12STRvStriatum ventral region100
100
Trip12THThalamus100
100
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00011397 24 34 57 SCSSSSAVIVPQPEDPDRANTSER Peptide Atlas
TRIPC_HUMAN_1548 11 1548 1558 QMLFYVTAFDR PRIDE
TRIPC_HUMAN_1601 13 1601 1613 QAESVMQDLGSSR PRIDE

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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