AutismKB 2.0

Annotation Detail for TRIP11


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Basic Information Top
Gene Symbol:TRIP11 ( ACG1A,CEV14,GMAP-210,TRIP230 )
Gene Full Name: thyroid hormone receptor interactor 11
Band: 14q32.12
Quick LinksEntrez ID:9321; OMIM: 604505; Uniprot ID:TRIPB_HUMAN; ENSEMBL ID: ENSG00000100815; HGNC ID: 12305
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body4 / 7076156
blastocyst3 / 6231948
fetus19 / 56401233
neonate1 / 3109732
infant0 / 236200 
juvenile0 / 555560 
adult81 / 193912141
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor1 / 9417810
cervical tumor0 / 343660 
chondrosarcoma2 / 8282324
colorectal tumor7 / 11424661
esophageal tumor0 / 172900 
gastrointestinal tumor5 / 11936941
germ cell tumor3 / 26384511
glioma1 / 1068839
head and neck tumor6 / 13630244
kidney tumor1 / 6895914
leukemia5 / 9584252
liver tumor1 / 9635910
lung tumor1 / 1031279
lymphoma1 / 7175513
non-neoplasia3 / 9725030
normal137 / 336030740
ovarian tumor1 / 7668213
pancreatic tumor2 / 10461619
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor4 / 12494932
soft tissue/muscle tissue tumor3 / 12519123
uterine tumor3 / 9025733
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue2 / 13106152
adrenal gland2 / 3319760
ascites1 / 4001524
bladder2 / 2975767
blood3 / 12347824
bone3 / 7165541
bone marrow0 / 488010 
brain19 / 110098917
cervix0 / 481710 
connective tissue5 / 14925533
ear0 / 162120 
embryonic tissue9 / 21572241
esophagus0 / 202090 
eye2 / 2110549
heart1 / 8962611
intestine9 / 23447238
kidney9 / 21177742
larynx2 / 2414582
liver7 / 20774333
lung15 / 33697444
lymph0 / 442700 
lymph node8 / 9161087
mammary gland3 / 15327119
mouth3 / 6705244
muscle13 / 107715120
nerve0 / 157680 
ovary2 / 10205119
pancreas5 / 21481223
parathyroid2 / 2053997
pharynx4 / 4132896
pituitary gland0 / 165850 
placenta15 / 28082553
prostate2 / 18934510
salivary gland0 / 201550 
skin6 / 21057428
spleen1 / 5395218
stomach4 / 9661941
testis4 / 33044212
thymus2 / 8113124
thyroid1 / 4747321
tonsil1 / 1699958
trachea0 / 524130 
umbilical cord0 / 136800 
uterus12 / 23287851
vascular3 / 5178057
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 209778_at
Cell line Expression level Expression bar
721_B_lymphoblasts6.2
Adipocyte4.35
AdrenalCortex4.6
Adrenalgland3.75
Amygdala4.6
Appendix4.7
AtrioventricularNode3.35
BDCA4+_DentriticCells4.85
Bonemarrow4.3
BronchialEpithelialCells4.3
CD105+_Endothelial5.4
CD14+_Monocytes4.7
CD19+_BCells(neg._sel.)4.95
CD33+_Myeloid5.65
CD34+5.55
CD4+_Tcells4.95
CD56+_NKCells5.35
CD71+_EarlyErythroid4.1
CD8+_Tcells4.45
CardiacMyocytes5.65
Caudatenucleus3.9
Cerebellum3.55
CerebellumPeduncles5
CiliaryGanglion3.1
CingulateCortex4.45
Colorectaladenocarcinoma4.4
DorsalRootGanglion3.35
FetalThyroid4.25
Fetalbrain4.3
Fetalliver3.8
Fetallung3.6
GlobusPallidus3.2
Heart5.65
Hypothalamus4.75
Kidney3.65
Leukemia_chronicMyelogenousK-5623.9
Leukemia_promyelocytic-HL-603.85
Leukemialymphoblastic(MOLT-4)3.55
Liver5.8
Lung4.8
Lymphnode3.8
Lymphoma_burkitts(Daudi)5.6
Lymphoma_burkitts(Raji)6.1
MedullaOblongata4
OccipitalLobe3.9
OlfactoryBulb3.45
Ovary2.9
Pancreas3.5
PancreaticIslet4.7
ParietalLobe4.65
Pituitary5.1
Placenta4.45
Pons4.2
PrefrontalCortex5.45
Prostate5.1
Salivarygland3.5
SkeletalMuscle5.15
Skin3.4
SmoothMuscle5
Spinalcord4.7
SubthalamicNucleus4
SuperiorCervicalGanglion5.5
TemporalLobe4
Testis3.7
TestisGermCell4.35
TestisIntersitial4.65
TestisLeydigCell4.3
TestisSeminiferousTubule3.75
Thalamus4.45
Thymus3.3
Thyroid5.45
Tongue4.3
Tonsil4.25
Trachea3.65
TrigeminalGanglion4.35
Uterus3.6
UterusCorpus4.1
WholeBlood4.75
Wholebrain3.6
colon4.4
pineal_day5.38
pineal_night5.36
retina5.275
small_intestine4.2
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P282172
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala5.7 ± 0.5
Basal Forebrain5.42 ± 0.27
Basal Part of Pons5.44 ± 0.41
Cerebellar Cortex5.73 ± 0.25
Cerebellar Nuclei5.59 ± 0.35
Claustrum5.79 ± 0.5
Epithalamus5.45 ± 0.24
Frontal Lobe5.24 ± 0.43
Globus Pallidus5.94 ± 0.53
Hypothalamus5.23 ± 0.46
Insula5.16 ± 0.45
Limbic Lobe5.41 ± 0.54
Mesencephalon5.47 ± 0.45
Myelencephalon5.47 ± 0.5
Occipital Lobe5.88 ± 0.47
Parietal Lobe5.5 ± 0.43
Pontine Tegmentum5.46 ± 0.58
Striatum5.47 ± 0.53
Subthalamus5.19 ± 0.44
Temporal Lobe5.37 ± 0.37
Thalamus5.41 ± 0.42
White Matter6.4 ± 0.38
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Trip11CBCerebellum10.99
11.33
Trip11CTXCerebral cortex17.46
11.99
Trip11HIPHippocampal region12.66
12.13
Trip11HPFHippocampal formation12.01
10.52
Trip11HYHypothalamus6.12
4.64
Trip11LSXLateral septal complex6.39
4.49
Trip11MBMidbrain10.26
9.46
Trip11MYMedulla10.49
10.49
Trip11OLFOlfactory bulb18.9
12.79
Trip11PPons11.01
10.91
Trip11PALPallidum7.58
6.44
Trip11RHPRetrohippocampal region10.9
8.23
Trip11sAMYStriatum-like amygdalar nuclei4.6
3.26
Trip11STRStriatum4.86
3.73
Trip11STRdStriatum dorsal region4.84
4.11
Trip11STRvStriatum ventral region4.78
2.94
Trip11THThalamus13.31
10.48
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00004419 18 73 90 KLCTDLEEKHEASEIQIK Peptide Atlas
TRIPB_HUMAN_1147 10 1147 1156 FESSGQDMFR PRIDE
TRIPB_HUMAN_36 18 36 53 DMLMEGTEEVEAELPDSR PRIDE

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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