AutismKB 2.0

Annotation Detail for TRIP10


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Basic Information Top
Gene Symbol:TRIP10 ( CIP4,HSTP,STOT,STP )
Gene Full Name: thyroid hormone receptor interactor 10
Band: 19p13.3
Quick LinksEntrez ID:9322; OMIM: 604504; Uniprot ID:CIP4_HUMAN; ENSEMBL ID: ENSG00000125733; HGNC ID: 12304
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body5 / 7076170
blastocyst7 / 62319112
fetus18 / 56401231
neonate2 / 3109764
infant0 / 236200 
juvenile1 / 5555617
adult188 / 193912196
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor14 / 94178148
cervical tumor1 / 3436629
chondrosarcoma13 / 82823156
colorectal tumor8 / 11424670
esophageal tumor0 / 172900 
gastrointestinal tumor8 / 11936967
germ cell tumor15 / 26384556
glioma1 / 1068839
head and neck tumor14 / 136302102
kidney tumor4 / 6895958
leukemia2 / 9584220
liver tumor5 / 9635951
lung tumor13 / 103127126
lymphoma0 / 717550 
non-neoplasia6 / 9725061
normal178 / 336030752
ovarian tumor6 / 7668278
pancreatic tumor7 / 10461666
primitive neuroectodermal tumor of the CNS3 / 12568023
prostate cancer11 / 102680107
retinoblastoma2 / 4635643
skin tumor3 / 12494924
soft tissue/muscle tissue tumor10 / 12519179
uterine tumor5 / 9025755
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland1 / 3319730
ascites1 / 4001524
bladder2 / 2975767
blood3 / 12347824
bone8 / 71655111
bone marrow1 / 4880120
brain21 / 110098919
cervix5 / 48171103
connective tissue10 / 14925566
ear0 / 162120 
embryonic tissue17 / 21572278
esophagus0 / 202090 
eye17 / 21105480
heart5 / 8962655
intestine17 / 23447272
kidney7 / 21177733
larynx4 / 24145165
liver6 / 20774328
lung30 / 33697489
lymph0 / 442700 
lymph node2 / 9161021
mammary gland15 / 15327197
mouth7 / 67052104
muscle27 / 107715250
nerve1 / 1576863
ovary9 / 10205188
pancreas12 / 21481255
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta29 / 280825103
prostate14 / 18934573
salivary gland2 / 2015599
skin5 / 21057423
spleen0 / 539520 
stomach5 / 9661951
testis10 / 33044230
thymus3 / 8113136
thyroid5 / 47473105
tonsil0 / 169990 
trachea1 / 5241319
umbilical cord0 / 136800 
uterus24 / 232878103
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 202734_at
Cell line Expression level Expression bar
721_B_lymphoblasts69.6
Adipocyte91.5
AdrenalCortex30.7
Adrenalgland37.5
Amygdala16.55
Appendix46.35
AtrioventricularNode18.65
BDCA4+_DentriticCells22.6
Bonemarrow23.75
BronchialEpithelialCells88.15
CD105+_Endothelial10
CD14+_Monocytes15.9
CD19+_BCells(neg._sel.)16.95
CD33+_Myeloid9.95
CD34+13.8
CD4+_Tcells16.7
CD56+_NKCells6.25
CD71+_EarlyErythroid13.65
CD8+_Tcells14.9
CardiacMyocytes33.4
Caudatenucleus13.6
Cerebellum20.3
CerebellumPeduncles26.15
CiliaryGanglion17.7
CingulateCortex21.45
Colorectaladenocarcinoma41.7
DorsalRootGanglion21.7
FetalThyroid59
Fetalbrain15.3
Fetalliver21.15
Fetallung90.15
GlobusPallidus13.6
Heart65.1
Hypothalamus19.25
Kidney39.15
Leukemia_chronicMyelogenousK-56255.45
Leukemia_promyelocytic-HL-6017.85
Leukemialymphoblastic(MOLT-4)16.95
Liver28.3
Lung53.65
Lymphnode38.75
Lymphoma_burkitts(Daudi)29.05
Lymphoma_burkitts(Raji)44.9
MedullaOblongata21.1
OccipitalLobe16.4
OlfactoryBulb31.95
Ovary23.95
Pancreas18.65
PancreaticIslet27.55
ParietalLobe19.4
Pituitary29.3
Placenta103.2
Pons23.55
PrefrontalCortex19.65
Prostate44.55
Salivarygland20.7
SkeletalMuscle349.75
Skin19.15
SmoothMuscle65.8
Spinalcord34.8
SubthalamicNucleus14.9
SuperiorCervicalGanglion27.4
TemporalLobe18.85
Testis58.55
TestisGermCell26.5
TestisIntersitial22.85
TestisLeydigCell28.35
TestisSeminiferousTubule31.55
Thalamus20.7
Thymus18.35
Thyroid116.55
Tongue108.3
Tonsil34.7
Trachea36.2
TrigeminalGanglion24.2
Uterus37.65
UterusCorpus42.45
WholeBlood18.35
Wholebrain13.2
colon38.55
pineal_day32.7
pineal_night29.74
retina60.225
small_intestine25.2
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_644_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.23 ± 1.09
Basal Forebrain1.79 ± 0.41
Basal Part of Pons1.22 ± 0.36
Cerebellar Cortex1.68 ± 1.04
Cerebellar Nuclei1.99 ± 0.77
Claustrum2.82 ± 1.06
Epithalamus1.85 ± 0.83
Frontal Lobe1.6 ± 0.85
Globus Pallidus2.54 ± 0.7
Hypothalamus1.83 ± 0.8
Insula1.5 ± 0.44
Limbic Lobe1.82 ± 0.79
Mesencephalon1.96 ± 0.8
Myelencephalon1.87 ± 0.81
Occipital Lobe1.81 ± 0.55
Parietal Lobe1.93 ± 0.87
Pontine Tegmentum1.85 ± 0.79
Striatum1.99 ± 0.59
Subthalamus1.84 ± 0.73
Temporal Lobe1.64 ± 0.69
Thalamus1.74 ± 0.64
White Matter2.09 ± 0.3
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
CIP4_HUMAN_115 7 115 121 MHFQEGR PRIDE
CIP4_HUMAN_413 9 413 421 ELQKEVDQR PRIDE
PAp00069205 25 430 454 HARPPDPPASAPPDSSSNSASQDTK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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