Annotation Detail for MRFAP1
Basic Information Top
| Gene Symbol: | MRFAP1 ( PAM14,PGR1 ) |
|---|---|
| Gene Full Name: | Mof4 family associated protein 1 |
| Band: | 4p16.1 |
| Quick Links | Entrez ID:93621; OMIM: NA; Uniprot ID:MOFA1_HUMAN; ENSEMBL ID: ENSG00000179010; HGNC ID: 24549 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.719546
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 9 / 70761 | 127 |  |
| blastocyst | 6 / 62319 | 96 | |
| fetus | 18 / 564012 | 31 |  |
| neonate | 2 / 31097 | 64 | |
| infant | 28 / 23620 | 1185 |  |
| juvenile | 11 / 55556 | 197 | |
| adult | 128 / 1939121 | 66 | |
| embryoid body | 20 / 70761 | 282 |  |
| blastocyst | 19 / 62319 | 304 | |
| fetus | 56 / 564012 | 99 | |
| neonate | 0 / 31097 | 0 | |
| infant | 4 / 23620 | 169 | |
| juvenile | 5 / 55556 | 89 | |
| adult | 281 / 1939121 | 144 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 6 / 94178 | 63 | |
| cervical tumor | 10 / 34366 | 290 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 5 / 114246 | 43 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 8 / 119369 | 67 | |
| germ cell tumor | 26 / 263845 | 98 | |
| glioma | 7 / 106883 | 65 | |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 3 / 95842 | 31 | |
| liver tumor | 22 / 96359 | 228 | |
| lung tumor | 7 / 103127 | 67 | |
| lymphoma | 3 / 71755 | 41 | |
| non-neoplasia | 47 / 97250 | 483 | |
| normal | 347 / 3360307 | 103 | |
| ovarian tumor | 3 / 76682 | 39 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 57 / 125680 | 453 | |
| prostate cancer | 8 / 102680 | 77 | |
| retinoblastoma | 8 / 46356 | 172 | |
| skin tumor | 11 / 124949 | 88 | |
| soft tissue/muscle tissue tumor | 7 / 125191 | 55 | |
| uterine tumor | 1 / 90257 | 11 | |
| adrenal tumor | 2 / 12794 | 156 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 27 / 94178 | 286 | |
| cervical tumor | 5 / 34366 | 145 | |
| chondrosarcoma | 2 / 82823 | 24 | |
| colorectal tumor | 9 / 114246 | 78 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 8 / 119369 | 67 | |
| germ cell tumor | 20 / 263845 | 75 | |
| glioma | 5 / 106883 | 46 | |
| head and neck tumor | 13 / 136302 | 95 | |
| kidney tumor | 4 / 68959 | 58 | |
| leukemia | 3 / 95842 | 31 | |
| liver tumor | 16 / 96359 | 166 | |
| lung tumor | 5 / 103127 | 48 | |
| lymphoma | 8 / 71755 | 111 | |
| non-neoplasia | 9 / 97250 | 92 | |
| normal | 337 / 3360307 | 100 | |
| ovarian tumor | 7 / 76682 | 91 | |
| pancreatic tumor | 4 / 104616 | 38 | |
| primitive neuroectodermal tumor of the CNS | 21 / 125680 | 167 | |
| prostate cancer | 74 / 102680 | 720 | |
| retinoblastoma | 10 / 46356 | 215 | |
| skin tumor | 13 / 124949 | 104 | |
| soft tissue/muscle tissue tumor | 19 / 125191 | 151 | |
| uterine tumor | 25 / 90257 | 276 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 2 / 13106 | 152 | |
| adrenal gland | 5 / 33197 | 150 | |
| ascites | 4 / 40015 | 99 | |
| bladder | 5 / 29757 | 168 | |
| blood | 4 / 123478 | 32 | |
| bone | 3 / 71655 | 41 | |
| bone marrow | 2 / 48801 | 40 | |
| brain | 229 / 1100989 | 207 | |
| cervix | 11 / 48171 | 228 | |
| connective tissue | 7 / 149255 | 46 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 21 / 215722 | 97 | |
| esophagus | 5 / 20209 | 247 | |
| eye | 14 / 211054 | 66 | |
| heart | 16 / 89626 | 178 | |
| intestine | 28 / 234472 | 119 | |
| kidney | 14 / 211777 | 66 | |
| larynx | 0 / 24145 | 0 | |
| liver | 27 / 207743 | 129 | |
| lung | 25 / 336974 | 74 | |
| lymph | 3 / 44270 | 67 | |
| lymph node | 1 / 91610 | 10 |  |
| mammary gland | 10 / 153271 | 65 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 12 / 107715 | 111 | |
| nerve | 2 / 15768 | 126 | |
| ovary | 8 / 102051 | 78 | |
| pancreas | 7 / 214812 | 32 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 27 / 280825 | 96 | |
| prostate | 11 / 189345 | 58 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 13 / 210574 | 61 | |
| spleen | 7 / 53952 | 129 | |
| stomach | 8 / 96619 | 82 | |
| testis | 47 / 330442 | 142 | |
| thymus | 20 / 81131 | 246 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 4 / 52413 | 76 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 19 / 232878 | 81 | |
| vascular | 2 / 51780 | 38 | |
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 3 / 33197 | 90 | |
| ascites | 4 / 40015 | 99 | |
| bladder | 4 / 29757 | 134 | |
| blood | 5 / 123478 | 40 | |
| bone | 4 / 71655 | 55 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 131 / 1100989 | 118 | |
| cervix | 7 / 48171 | 145 | |
| connective tissue | 4 / 149255 | 26 | |
| ear | 5 / 16212 | 308 | |
| embryonic tissue | 69 / 215722 | 319 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 23 / 211054 | 108 | |
| heart | 8 / 89626 | 89 | |
| intestine | 17 / 234472 | 72 | |
| kidney | 8 / 211777 | 37 | |
| larynx | 4 / 24145 | 165 | |
| liver | 23 / 207743 | 110 | |
| lung | 35 / 336974 | 103 | |
| lymph | 4 / 44270 | 90 | |
| lymph node | 2 / 91610 | 21 | |
| mammary gland | 30 / 153271 | 195 | |
| mouth | 6 / 67052 | 89 | |
| muscle | 9 / 107715 | 83 | |
| nerve | 3 / 15768 | 190 | |
| ovary | 9 / 102051 | 88 | |
| pancreas | 16 / 214812 | 74 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 2 / 41328 | 48 | |
| pituitary gland | 7 / 16585 | 422 | |
| placenta | 52 / 280825 | 185 | |
| prostate | 75 / 189345 | 396 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 17 / 210574 | 80 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 6 / 96619 | 62 | |
| testis | 21 / 330442 | 63 | |
| thymus | 3 / 81131 | 36 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 47 / 232878 | 201 | |
| vascular | 4 / 51780 | 77 | |
Microarray in - Probe name: A_24_P11965
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 9.22 ± 0.35 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 9.01 ± 0.28 | |
| Basal Part of Pons | 9.13 ± 0.35 | |
| Cerebellar Cortex | 8.8 ± 0.32 | |
| Cerebellar Nuclei | 8.94 ± 0.31 | |
| Claustrum | 9.39 ± 0.35 | |
| Epithalamus | 8.77 ± 0.31 | |
| Frontal Lobe | 8.93 ± 0.31 | |
| Globus Pallidus | 9.35 ± 0.19 | |
| Hypothalamus | 8.94 ± 0.13 | |
| Insula | 8.88 ± 0.19 | |
| Limbic Lobe | 8.98 ± 0.29 | |
| Mesencephalon | 9 ± 0.32 | |
| Myelencephalon | 8.97 ± 0.33 | |
| Occipital Lobe | 8.8 ± 0.25 | |
| Parietal Lobe | 8.98 ± 0.33 | |
| Pontine Tegmentum | 8.9 ± 0.25 | |
| Striatum | 8.97 ± 0.31 | |
| Subthalamus | 8.97 ± 0.06 | |
| Temporal Lobe | 9 ± 0.3 | |
| Thalamus | 8.92 ± 0.32 | |
| White Matter | 9.58 ± 0.26 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Mrfap1 | CB | Cerebellum | 100 | |
| 100 | | |||
| Mrfap1 | CTX | Cerebral cortex | 100 | |
| 100 | | |||
| Mrfap1 | HIP | Hippocampal region | 100 | |
| 100 | | |||
| Mrfap1 | HPF | Hippocampal formation | 100 | |
| 100 | | |||
| Mrfap1 | HY | Hypothalamus | 100 | |
| 100 | | |||
| Mrfap1 | LSX | Lateral septal complex | 100 | |
| 100 | | |||
| Mrfap1 | MB | Midbrain | 100 | |
| 100 | | |||
| Mrfap1 | MY | Medulla | 100 | |
| 100 | | |||
| Mrfap1 | OLF | Olfactory bulb | 100 | |
| 100 | | |||
| Mrfap1 | P | Pons | 100 | |
| 100 | | |||
| Mrfap1 | PAL | Pallidum | 100 | |
| 100 | | |||
| Mrfap1 | RHP | Retrohippocampal region | 100 | |
| 100 | | |||
| Mrfap1 | sAMY | Striatum-like amygdalar nuclei | 100 | |
| 100 | | |||
| Mrfap1 | STR | Striatum | 100 | |
| 100 | | |||
| Mrfap1 | STRd | Striatum dorsal region | 100 | |
| 100 | | |||
| Mrfap1 | STRv | Striatum ventral region | 100 | |
| 100 | | |||
| Mrfap1 | TH | Thalamus | 100 | |
| 100 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00496778 | 24 | 69 | 92 | TQVEASEESALNHLQNPGDAAEGR | Peptide Atlas |