AutismKB 2.0

Annotation Detail for RAB33A


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Basic Information Top
Gene Symbol:RAB33A ( MGC1488,RabS10 )
Gene Full Name: RAB33A, member RAS oncogene family
Band: Xq26.1
Quick LinksEntrez ID:9363; OMIM: 300333; Uniprot ID:RB33A_HUMAN; ENSEMBL ID: ENSG00000134594; HGNC ID: 9773
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus9 / 56401215
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult12 / 19391216
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor0 / 2638450 
glioma7 / 10688365
head and neck tumor0 / 1363020 
kidney tumor2 / 6895929
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor1 / 1031279
lymphoma3 / 7175541
non-neoplasia3 / 9725030
normal37 / 336030711
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS6 / 12568047
prostate cancer0 / 1026800 
retinoblastoma2 / 4635643
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor3 / 12519123
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood1 / 1234788
bone0 / 716550 
bone marrow0 / 488010 
brain28 / 110098925
cervix0 / 481710 
connective tissue3 / 14925520
ear0 / 162120 
embryonic tissue1 / 2157224
esophagus0 / 202090 
eye12 / 21105456
heart0 / 896260 
intestine2 / 2344728
kidney3 / 21177714
larynx0 / 241450 
liver0 / 2077430 
lung1 / 3369742
lymph3 / 4427067
lymph node1 / 9161010
mammary gland0 / 1532710 
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary0 / 1020510 
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta2 / 2808257
prostate0 / 1893450 
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach0 / 966190 
testis0 / 3304420 
thymus0 / 811310 
thyroid0 / 474730 
tonsil1 / 1699958
trachea0 / 524130 
umbilical cord0 / 136800 
uterus0 / 2328780 
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 206039_at
Cell line Expression level Expression bar
721_B_lymphoblasts81.85
Adipocyte4.8
AdrenalCortex5.05
Adrenalgland4.1
Amygdala15.15
Appendix4.85
AtrioventricularNode3.7
BDCA4+_DentriticCells4.9
Bonemarrow4.75
BronchialEpithelialCells4.8
CD105+_Endothelial4.85
CD14+_Monocytes5.2
CD19+_BCells(neg._sel.)5.25
CD33+_Myeloid6.05
CD34+6.25
CD4+_Tcells5.4
CD56+_NKCells8
CD71+_EarlyErythroid4.45
CD8+_Tcells4.85
CardiacMyocytes6.35
Caudatenucleus5.45
Cerebellum22.8
CerebellumPeduncles10.65
CiliaryGanglion3.45
CingulateCortex6.45
Colorectaladenocarcinoma4.85
DorsalRootGanglion3.75
FetalThyroid4.75
Fetalbrain12.05
Fetalliver4.2
Fetallung4.1
GlobusPallidus3.65
Heart6.5
Hypothalamus15.35
Kidney3.9
Leukemia_chronicMyelogenousK-5624.3
Leukemia_promyelocytic-HL-607.9
Leukemialymphoblastic(MOLT-4)13
Liver6.4
Lung5.4
Lymphnode4.25
Lymphoma_burkitts(Daudi)6.8
Lymphoma_burkitts(Raji)51.05
MedullaOblongata7.15
OccipitalLobe4.95
OlfactoryBulb3.8
Ovary3.25
Pancreas3.9
PancreaticIslet5.2
ParietalLobe7.1
Pituitary5.7
Placenta5
Pons4.6
PrefrontalCortex10.1
Prostate5.75
Salivarygland3.9
SkeletalMuscle5.7
Skin3.75
SmoothMuscle5.25
Spinalcord5.9
SubthalamicNucleus5.3
SuperiorCervicalGanglion5.55
TemporalLobe4.7
Testis4.2
TestisGermCell4.05
TestisIntersitial4.1
TestisLeydigCell4.8
TestisSeminiferousTubule4.15
Thalamus7.55
Thymus3.85
Thyroid5.95
Tongue4.7
Tonsil4.75
Trachea4.05
TrigeminalGanglion4.8
Uterus3.9
UterusCorpus6.05
WholeBlood5.5
Wholebrain72.8
colon4.7
pineal_day5.72
pineal_night5.62
retina6.1
small_intestine4.65
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_1239_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala5.69 ± 0.48
Basal Forebrain5.53 ± 0.58
Basal Part of Pons6.06 ± 0.5
Cerebellar Cortex6.15 ± 0.18
Cerebellar Nuclei5.98 ± 0.48
Claustrum6.39 ± 0.39
Epithalamus4.96 ± 0.92
Frontal Lobe5.95 ± 0.41
Globus Pallidus5.52 ± 0.27
Hypothalamus5.53 ± 0.68
Insula5.91 ± 0.33
Limbic Lobe5.57 ± 0.48
Mesencephalon5.64 ± 0.54
Myelencephalon5.77 ± 0.56
Occipital Lobe5.32 ± 0.48
Parietal Lobe5.62 ± 0.39
Pontine Tegmentum5.81 ± 0.47
Striatum4.87 ± 0.45
Subthalamus5.78 ± 0.14
Temporal Lobe5.87 ± 0.42
Thalamus6 ± 0.37
White Matter7.39 ± 0.39
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Rab33aCBCerebellum2.34
2.79
Rab33aCTXCerebral cortex5.68
4.55
Rab33aHIPHippocampal region2.56
2.26
Rab33aHPFHippocampal formation2.09
1.75
Rab33aHYHypothalamus0.49
0.39
Rab33aLSXLateral septal complex0.7
0.57
Rab33aMBMidbrain1.43
1.83
Rab33aMYMedulla1.26
1.46
Rab33aOLFOlfactory bulb8.43
7.24
Rab33aPPons0.87
1.14
Rab33aPALPallidum0.57
0.51
Rab33aRHPRetrohippocampal region1.31
1.05
Rab33asAMYStriatum-like amygdalar nuclei0.27
0.17
Rab33aSTRStriatum0.6
0.48
Rab33aSTRdStriatum dorsal region0.65
0.57
Rab33aSTRvStriatum ventral region0.48
0.27
Rab33aTHThalamus2.61
2.22
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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