Annotation Detail for CADPS2
Basic Information Top
| Gene Symbol: | CADPS2 ( FLJ40851,KIAA1591 ) |
|---|---|
| Gene Full Name: | Ca++-dependent secretion activator 2 |
| Band: | 7q31.32 |
| Quick Links | Entrez ID:93664; OMIM: 609978; Uniprot ID:CAPS2_HUMAN; ENSEMBL ID: ENSG00000081803; HGNC ID: 16018 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.726434
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 3 / 62319 | 48 |  |
| fetus | 1 / 564012 | 1 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 5 / 55556 | 89 |  |
| adult | 16 / 1939121 | 8 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 1 / 114246 | 8 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 1 / 119369 | 8 | |
| germ cell tumor | 1 / 263845 | 3 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 1 / 136302 | 7 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 1 / 95842 | 10 | |
| liver tumor | 3 / 96359 | 31 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 72 / 3360307 | 21 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 1 / 125680 | 7 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 3 / 124949 | 24 | |
| soft tissue/muscle tissue tumor | 3 / 125191 | 23 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 1 / 29757 | 33 | |
| blood | 0 / 123478 | 0 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 44 / 1100989 | 39 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 4 / 149255 | 26 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 3 / 215722 | 13 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 0 / 211054 | 0 | |
| heart | 0 / 89626 | 0 | |
| intestine | 6 / 234472 | 25 | |
| kidney | 10 / 211777 | 47 | |
| larynx | 0 / 24145 | 0 | |
| liver | 3 / 207743 | 14 | |
| lung | 3 / 336974 | 8 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 2 / 153271 | 13 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 4 / 214812 | 18 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 4 / 189345 | 21 | |
| salivary gland | 1 / 20155 | 49 | |
| skin | 4 / 210574 | 18 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 1 / 96619 | 10 | |
| testis | 1 / 330442 | 3 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 5 / 52413 | 95 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 20 / 232878 | 85 | |
| vascular | 4 / 51780 | 77 | |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 219572_at
| Cell line | Expression level | Expression bar |
|---|---|---|
| ||
| 721_B_lymphoblasts | 6.45 | |
| Adipocyte | 5.05 | |
| AdrenalCortex | 6 | |
| Adrenalgland | 6.3 | |
| Amygdala | 13.25 | |
| Appendix | 5.15 | |
| AtrioventricularNode | 9.35 | |
| BDCA4+_DentriticCells | 5.45 | |
| Bonemarrow | 5 | |
| BronchialEpithelialCells | 5 | |
| CD105+_Endothelial | 5.1 | |
| CD14+_Monocytes | 5.4 | |
| CD19+_BCells(neg._sel.) | 5.35 | |
| CD33+_Myeloid | 6.4 | |
| CD34+ | 6.5 | |
| CD4+_Tcells | 5.55 | |
| CD56+_NKCells | 5.95 | |
| CD71+_EarlyErythroid | 4.7 | |
| CD8+_Tcells | 4.85 | |
| CardiacMyocytes | 6.4 | |
| Caudatenucleus | 4.65 | |
| Cerebellum | 72.1 | |
| CerebellumPeduncles | 149.35 | |
| CiliaryGanglion | 4.8 | |
| CingulateCortex | 7.6 | |
| Colorectaladenocarcinoma | 5.15 | |
| DorsalRootGanglion | 4.3 | |
| FetalThyroid | 5 | |
| Fetalbrain | 5.25 | |
| Fetalliver | 4.6 | |
| Fetallung | 5.1 | |
| GlobusPallidus | 11.55 | |
| Heart | 7.05 | |
| Hypothalamus | 7.35 | |
| Kidney | 4.45 | |
| Leukemia_chronicMyelogenousK-562 | 4.6 | |
| Leukemia_promyelocytic-HL-60 | 4.45 | |
| Leukemialymphoblastic(MOLT-4) | 4 | |
| Liver | 6.8 | |
| Lung | 5.65 | |
| Lymphnode | 4.35 | |
| Lymphoma_burkitts(Daudi) | 6.5 | |
| Lymphoma_burkitts(Raji) | 6.95 | |
| MedullaOblongata | 20.7 | |
| OccipitalLobe | 11.05 | |
| OlfactoryBulb | 4.05 | |
| Ovary | 4 | |
| Pancreas | 5.9 | |
| PancreaticIslet | 6.35 | |
| ParietalLobe | 7.65 | |
| Pituitary | 14.55 | |
| Placenta | 5.2 | |
| Pons | 6.4 | |
| PrefrontalCortex | 98.2 | |
| Prostate | 6.1 | |
| Salivarygland | 25.15 | |
| SkeletalMuscle | 6 | |
| Skin | 4.2 | |
| SmoothMuscle | 5.8 | |
| Spinalcord | 5.45 | |
| SubthalamicNucleus | 13.9 | |
| SuperiorCervicalGanglion | 6.4 | |
| TemporalLobe | 11.3 | |
| Testis | 4.4 | |
| TestisGermCell | 4.2 | |
| TestisIntersitial | 4.35 | |
| TestisLeydigCell | 5.1 | |
| TestisSeminiferousTubule | 4.4 | |
| Thalamus | 5.25 | |
| Thymus | 3.95 | |
| Thyroid | 8.9 | |
| Tongue | 5.2 | |
| Tonsil | 5.05 | |
| Trachea | 9.2 | |
| TrigeminalGanglion | 5.65 | |
| Uterus | 112.35 | |
| UterusCorpus | 6.05 | |
| WholeBlood | 5.6 | |
| Wholebrain | 13.35 | |
| colon | 5.55 | |
| pineal_day | 6.34 | |
| pineal_night | 6.16 | |
| retina | 13.625 | |
| small_intestine | 5.05 | |
- Probe name: CUST_139_PI416408490
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.6 ± 0.59 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7.29 ± 0.32 | |
| Basal Part of Pons | 5.85 ± 0.58 | |
| Cerebellar Cortex | 8.59 ± 0.42 | |
| Cerebellar Nuclei | 5.27 ± 0.87 | |
| Claustrum | 8.45 ± 0.4 | |
| Epithalamus | 7.5 ± 0.94 | |
| Frontal Lobe | 7.28 ± 1 | |
| Globus Pallidus | 4.55 ± 1.17 | |
| Hypothalamus | 8.13 ± 0.91 | |
| Insula | 7.11 ± 0.59 | |
| Limbic Lobe | 7.2 ± 1.55 | |
| Mesencephalon | 7.95 ± 1.53 | |
| Myelencephalon | 7.36 ± 1.12 | |
| Occipital Lobe | 8.41 ± 0.44 | |
| Parietal Lobe | 8.03 ± 0.67 | |
| Pontine Tegmentum | 7.09 ± 0.84 | |
| Striatum | 5.04 ± 0.98 | |
| Subthalamus | 5.97 ± 0.72 | |
| Temporal Lobe | 7.58 ± 0.79 | |
| Thalamus | 7.05 ± 0.59 | |
| White Matter | 5.92 ± 0.31 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Cadps2 | CB | Cerebellum | 77.05 | |
| 88.11 | | |||
| Cadps2 | CTX | Cerebral cortex | 67.39 | |
| 69.97 | | |||
| Cadps2 | HIP | Hippocampal region | 28.43 | |
| 54.68 | | |||
| Cadps2 | HPF | Hippocampal formation | 32.18 | |
| 55.35 | | |||
| Cadps2 | HY | Hypothalamus | 24.36 | |
| 25.44 | | |||
| Cadps2 | LSX | Lateral septal complex | 15.17 | |
| 14.23 | | |||
| Cadps2 | MB | Midbrain | 13.09 | |
| 18 | | |||
| Cadps2 | MY | Medulla | 11.26 | |
| 13.48 | | |||
| Cadps2 | OLF | Olfactory bulb | 39.66 | |
| 41.23 | | |||
| Cadps2 | P | Pons | 9.13 | |
| 11.3 | | |||
| Cadps2 | PAL | Pallidum | 20.23 | |
| 24.82 | | |||
| Cadps2 | RHP | Retrohippocampal region | 39.6 | |
| 57.18 | | |||
| Cadps2 | sAMY | Striatum-like amygdalar nuclei | 38.05 | |
| 39.19 | | |||
| Cadps2 | STR | Striatum | 8.2 | |
| 8.64 | | |||
| Cadps2 | STRd | Striatum dorsal region | 2.74 | |
| 3.27 | | |||
| Cadps2 | STRv | Striatum ventral region | 4.62 | |
| 4.76 | | |||
| Cadps2 | TH | Thalamus | 7.39 | |
| 12.04 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00026211 | 24 | 251 | 274 | KLEHQLLYNACQLDNADEQAAQIR | Peptide Atlas |