Annotation Detail for PIGS
Basic Information Top
| Gene Symbol: | PIGS ( DKFZp686K20216,FLJ45226 ) |
|---|---|
| Gene Full Name: | phosphatidylinositol glycan anchor biosynthesis, class S |
| Band: | 17q11.2 |
| Quick Links | Entrez ID:94005; OMIM: 610271; Uniprot ID:PIGS_HUMAN; ENSEMBL ID: ENSG00000087111; HGNC ID: 14937 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.462550
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 3 / 70761 | 42 |  |
| blastocyst | 1 / 62319 | 16 | |
| fetus | 38 / 564012 | 67 |  |
| neonate | 2 / 31097 | 64 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 10 / 55556 | 179 | |
| adult | 121 / 1939121 | 62 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 | |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 9 / 94178 | 95 | |
| cervical tumor | 4 / 34366 | 116 | |
| chondrosarcoma | 6 / 82823 | 72 | |
| colorectal tumor | 5 / 114246 | 43 | |
| esophageal tumor | 5 / 17290 | 289 |  |
| gastrointestinal tumor | 12 / 119369 | 100 | |
| germ cell tumor | 36 / 263845 | 136 | |
| glioma | 12 / 106883 | 112 | |
| head and neck tumor | 19 / 136302 | 139 | |
| kidney tumor | 8 / 68959 | 116 | |
| leukemia | 7 / 95842 | 73 | |
| liver tumor | 10 / 96359 | 103 | |
| lung tumor | 8 / 103127 | 77 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 5 / 97250 | 51 | |
| normal | 247 / 3360307 | 73 | |
| ovarian tumor | 6 / 76682 | 78 | |
| pancreatic tumor | 17 / 104616 | 162 | |
| primitive neuroectodermal tumor of the CNS | 10 / 125680 | 79 | |
| prostate cancer | 12 / 102680 | 116 | |
| retinoblastoma | 6 / 46356 | 129 | |
| skin tumor | 3 / 124949 | 24 | |
| soft tissue/muscle tissue tumor | 8 / 125191 | 63 | |
| uterine tumor | 7 / 90257 | 77 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 3 / 33197 | 90 | |
| ascites | 7 / 40015 | 174 | |
| bladder | 1 / 29757 | 33 | |
| blood | 10 / 123478 | 80 | |
| bone | 7 / 71655 | 97 | |
| bone marrow | 4 / 48801 | 81 | |
| brain | 101 / 1100989 | 91 | |
| cervix | 4 / 48171 | 83 | |
| connective tissue | 13 / 149255 | 87 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 9 / 215722 | 41 | |
| esophagus | 5 / 20209 | 247 | |
| eye | 19 / 211054 | 90 | |
| heart | 7 / 89626 | 78 | |
| intestine | 12 / 234472 | 51 | |
| kidney | 27 / 211777 | 127 | |
| larynx | 4 / 24145 | 165 | |
| liver | 11 / 207743 | 52 | |
| lung | 28 / 336974 | 83 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 14 / 153271 | 91 | |
| mouth | 16 / 67052 | 238 | |
| muscle | 5 / 107715 | 46 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 8 / 102051 | 78 | |
| pancreas | 21 / 214812 | 97 | |
| parathyroid | 2 / 20539 | 97 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 8 / 280825 | 28 | |
| prostate | 20 / 189345 | 105 | |
| salivary gland | 1 / 20155 | 49 | |
| skin | 11 / 210574 | 52 | |
| spleen | 7 / 53952 | 129 | |
| stomach | 5 / 96619 | 51 | |
| testis | 33 / 330442 | 99 | |
| thymus | 8 / 81131 | 98 | |
| thyroid | 6 / 47473 | 126 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 3 / 52413 | 57 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 13 / 232878 | 55 | |
| vascular | 5 / 51780 | 96 | |
- Probe name: CUST_8452_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 3.31 ± 0.64 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 3.18 ± 0.63 | |
| Basal Part of Pons | 3.85 ± 0.36 | |
| Cerebellar Cortex | 3.93 ± 0.3 | |
| Cerebellar Nuclei | 3.43 ± 0.37 | |
| Claustrum | 3.61 ± 0.52 | |
| Epithalamus | 3.26 ± 0.47 | |
| Frontal Lobe | 3.68 ± 0.49 | |
| Globus Pallidus | 3.31 ± 0.59 | |
| Hypothalamus | 3.67 ± 0.4 | |
| Insula | 3.36 ± 0.61 | |
| Limbic Lobe | 3.78 ± 0.47 | |
| Mesencephalon | 3.48 ± 0.54 | |
| Myelencephalon | 3.54 ± 0.51 | |
| Occipital Lobe | 3.52 ± 0.52 | |
| Parietal Lobe | 3.59 ± 0.42 | |
| Pontine Tegmentum | 3.57 ± 0.61 | |
| Striatum | 3.2 ± 0.53 | |
| Subthalamus | 3.32 ± 0.3 | |
| Temporal Lobe | 3.57 ± 0.49 | |
| Thalamus | 3.59 ± 0.45 | |
| White Matter | 3.79 ± 0.41 | |
Mouse Brain ISH 
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00000123 | 14 | 2 | 15 | AAAGAAATHLEVAR | Peptide Atlas |
| PIGS_HUMAN_1 | 14 | 1 | 14 | AAAGAAATHLEVAR | PRIDE |
| PIGS_HUMAN_384 | 10 | 384 | 393 | VMEVFLAQLR | PRIDE |
| PIGS_HUMAN_60 | 11 | 60 | 70 | LMVPVTVVFTR | PRIDE |