Annotation Detail for ZRANB2
Basic Information Top
| Gene Symbol: | ZRANB2 ( DKFZp686J1831,DKFZp686N09117,FLJ41119,ZIS,ZIS1,ZIS2,ZNF265 ) |
|---|---|
| Gene Full Name: | zinc finger, RAN-binding domain containing 2 |
| Band: | 1p31.1 |
| Quick Links | Entrez ID:9406; OMIM: 604347; Uniprot ID:ZRAB2_HUMAN; ENSEMBL ID: ENSG00000132485; HGNC ID: 13058 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.194718
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 5 / 70761 | 70 |  |
| blastocyst | 12 / 62319 | 192 | |
| fetus | 72 / 564012 | 127 | |
| neonate | 1 / 31097 | 32 |  |
| infant | 3 / 23620 | 127 | |
| juvenile | 8 / 55556 | 143 | |
| adult | 214 / 1939121 | 110 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 2 / 12794 | 156 | |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 2 / 34366 | 58 | |
| chondrosarcoma | 8 / 82823 | 96 | |
| colorectal tumor | 6 / 114246 | 52 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 16 / 119369 | 134 | |
| germ cell tumor | 45 / 263845 | 170 | |
| glioma | 3 / 106883 | 28 | |
| head and neck tumor | 16 / 136302 | 117 | |
| kidney tumor | 10 / 68959 | 145 | |
| leukemia | 8 / 95842 | 83 | |
| liver tumor | 13 / 96359 | 134 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 2 / 71755 | 27 | |
| non-neoplasia | 6 / 97250 | 61 | |
| normal | 578 / 3360307 | 172 | |
| ovarian tumor | 5 / 76682 | 65 | |
| pancreatic tumor | 10 / 104616 | 95 | |
| primitive neuroectodermal tumor of the CNS | 11 / 125680 | 87 | |
| prostate cancer | 3 / 102680 | 29 | |
| retinoblastoma | 3 / 46356 | 64 | |
| skin tumor | 5 / 124949 | 40 | |
| soft tissue/muscle tissue tumor | 7 / 125191 | 55 | |
| uterine tumor | 14 / 90257 | 155 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 2 / 13106 | 152 | |
| adrenal gland | 9 / 33197 | 271 |  |
| ascites | 6 / 40015 | 149 | |
| bladder | 2 / 29757 | 67 | |
| blood | 12 / 123478 | 97 | |
| bone | 5 / 71655 | 69 | |
| bone marrow | 6 / 48801 | 122 | |
| brain | 170 / 1100989 | 154 | |
| cervix | 2 / 48171 | 41 | |
| connective tissue | 10 / 149255 | 66 | |
| ear | 4 / 16212 | 246 | |
| embryonic tissue | 32 / 215722 | 148 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 20 / 211054 | 94 | |
| heart | 8 / 89626 | 89 | |
| intestine | 13 / 234472 | 55 | |
| kidney | 16 / 211777 | 75 | |
| larynx | 3 / 24145 | 124 | |
| liver | 175 / 207743 | 842 | |
| lung | 20 / 336974 | 59 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 19 / 91610 | 207 | |
| mammary gland | 4 / 153271 | 26 | |
| mouth | 7 / 67052 | 104 | |
| muscle | 31 / 107715 | 287 | |
| nerve | 3 / 15768 | 190 | |
| ovary | 7 / 102051 | 68 | |
| pancreas | 17 / 214812 | 79 | |
| parathyroid | 2 / 20539 | 97 | |
| pharynx | 3 / 41328 | 72 | |
| pituitary gland | 4 / 16585 | 241 | |
| placenta | 28 / 280825 | 99 | |
| prostate | 19 / 189345 | 100 | |
| salivary gland | 1 / 20155 | 49 | |
| skin | 9 / 210574 | 42 | |
| spleen | 6 / 53952 | 111 | |
| stomach | 9 / 96619 | 93 | |
| testis | 47 / 330442 | 142 | |
| thymus | 19 / 81131 | 234 | |
| thyroid | 8 / 47473 | 168 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 8 / 52413 | 152 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 41 / 232878 | 176 | |
| vascular | 11 / 51780 | 212 | |
Microarray in - Probe name: A_23_P85521
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.26 ± 0.21 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7.22 ± 0.2 | |
| Basal Part of Pons | 7.37 ± 0.25 | |
| Cerebellar Cortex | 7.43 ± 0.2 | |
| Cerebellar Nuclei | 7.16 ± 0.26 | |
| Claustrum | 6.97 ± 0.27 | |
| Epithalamus | 7.54 ± 0.29 | |
| Frontal Lobe | 7.26 ± 0.29 | |
| Globus Pallidus | 6.98 ± 0.23 | |
| Hypothalamus | 7.18 ± 0.23 | |
| Insula | 7.22 ± 0.35 | |
| Limbic Lobe | 7.25 ± 0.32 | |
| Mesencephalon | 7.12 ± 0.27 | |
| Myelencephalon | 7.2 ± 0.28 | |
| Occipital Lobe | 7.37 ± 0.28 | |
| Parietal Lobe | 7.28 ± 0.24 | |
| Pontine Tegmentum | 7.24 ± 0.26 | |
| Striatum | 7.15 ± 0.2 | |
| Subthalamus | 7.14 ± 0.19 | |
| Temporal Lobe | 7.26 ± 0.25 | |
| Thalamus | 7.19 ± 0.22 | |
| White Matter | 7.88 ± 0.19 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Zranb2 | CB | Cerebellum | 22.38 | |
| 23.42 | | |||
| Zranb2 | CTX | Cerebral cortex | 37.01 | |
| 28.36 | | |||
| Zranb2 | HIP | Hippocampal region | 32.41 | |
| 39.47 | | |||
| Zranb2 | HPF | Hippocampal formation | 32.26 | |
| 33.56 | | |||
| Zranb2 | HY | Hypothalamus | 15.46 | |
| 12.39 | | |||
| Zranb2 | LSX | Lateral septal complex | 7.32 | |
| 5.64 | | |||
| Zranb2 | MB | Midbrain | 21.92 | |
| 19.85 | | |||
| Zranb2 | MY | Medulla | 32.94 | |
| 33.16 | | |||
| Zranb2 | OLF | Olfactory bulb | 44.3 | |
| 37.59 | | |||
| Zranb2 | P | Pons | 30.13 | |
| 29.02 | | |||
| Zranb2 | PAL | Pallidum | 15.82 | |
| 13.03 | | |||
| Zranb2 | RHP | Retrohippocampal region | 32.43 | |
| 25.99 | | |||
| Zranb2 | sAMY | Striatum-like amygdalar nuclei | 19.53 | |
| 13.24 | | |||
| Zranb2 | STR | Striatum | 6.65 | |
| 4.99 | | |||
| Zranb2 | STRd | Striatum dorsal region | 3.96 | |
| 3.17 | | |||
| Zranb2 | STRv | Striatum ventral region | 8.67 | |
| 6.25 | | |||
| Zranb2 | TH | Thalamus | 25.93 | |
| 20.98 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00001025 | 8 | 20 | 27 | CGNVNFAR | Peptide Atlas |
| ZRAB2_HUMAN_2 | 6 | 2 | 7 | STKNFR | PRIDE |
| ZRAB2_HUMAN_208 | 9 | 208 | 216 | SSHSRSSSR | PRIDE |