Annotation Detail for TJP2
Basic Information Top
Gene Symbol: | TJP2 ( MGC26306,X104,ZO2 ) |
---|---|
Gene Full Name: | tight junction protein 2 (zona occludens 2) |
Band: | 9q21.11 |
Quick Links | Entrez ID:9414; OMIM: 607709; Uniprot ID:ZO2_HUMAN; ENSEMBL ID: ENSG00000119139; HGNC ID: 11828 |
Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.50382
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
embryoid body | 13 / 70761 | 183 | |
blastocyst | 3 / 62319 | 48 | |
fetus | 33 / 564012 | 58 | |
neonate | 2 / 31097 | 64 | |
infant | 0 / 23620 | 0 | |
juvenile | 8 / 55556 | 143 | |
adult | 178 / 1939121 | 91 |
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
adrenal tumor | 1 / 12794 | 78 | |
bladder carcinoma | 0 / 17475 | 0 | |
breast (mammary gland) tumor | 8 / 94178 | 84 | |
cervical tumor | 4 / 34366 | 116 | |
chondrosarcoma | 8 / 82823 | 96 | |
colorectal tumor | 32 / 114246 | 280 | |
esophageal tumor | 0 / 17290 | 0 | |
gastrointestinal tumor | 11 / 119369 | 92 | |
germ cell tumor | 9 / 263845 | 34 | |
glioma | 5 / 106883 | 46 | |
head and neck tumor | 23 / 136302 | 168 | |
kidney tumor | 7 / 68959 | 101 | |
leukemia | 4 / 95842 | 41 | |
liver tumor | 15 / 96359 | 155 | |
lung tumor | 4 / 103127 | 38 | |
lymphoma | 7 / 71755 | 97 | |
non-neoplasia | 10 / 97250 | 102 | |
normal | 325 / 3360307 | 96 | |
ovarian tumor | 3 / 76682 | 39 | |
pancreatic tumor | 5 / 104616 | 47 | |
primitive neuroectodermal tumor of the CNS | 4 / 125680 | 31 | |
prostate cancer | 8 / 102680 | 77 | |
retinoblastoma | 0 / 46356 | 0 | |
skin tumor | 0 / 124949 | 0 | |
soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
uterine tumor | 10 / 90257 | 110 |
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
adipose tissue | 0 / 13106 | 0 | |
adrenal gland | 1 / 33197 | 30 | |
ascites | 1 / 40015 | 24 | |
bladder | 1 / 29757 | 33 | |
blood | 4 / 123478 | 32 | |
bone | 6 / 71655 | 83 | |
bone marrow | 0 / 48801 | 0 | |
brain | 158 / 1100989 | 143 | |
cervix | 6 / 48171 | 124 | |
connective tissue | 4 / 149255 | 26 | |
ear | 0 / 16212 | 0 | |
embryonic tissue | 23 / 215722 | 106 | |
esophagus | 0 / 20209 | 0 | |
eye | 20 / 211054 | 94 | |
heart | 3 / 89626 | 33 | |
intestine | 44 / 234472 | 187 | |
kidney | 18 / 211777 | 84 | |
larynx | 4 / 24145 | 165 | |
liver | 29 / 207743 | 139 | |
lung | 28 / 336974 | 83 | |
lymph | 0 / 44270 | 0 | |
lymph node | 5 / 91610 | 54 | |
mammary gland | 15 / 153271 | 97 | |
mouth | 8 / 67052 | 119 | |
muscle | 1 / 107715 | 9 | |
nerve | 1 / 15768 | 63 | |
ovary | 3 / 102051 | 29 | |
pancreas | 10 / 214812 | 46 | |
parathyroid | 7 / 20539 | 340 | |
pharynx | 3 / 41328 | 72 | |
pituitary gland | 0 / 16585 | 0 | |
placenta | 11 / 280825 | 39 | |
prostate | 11 / 189345 | 58 | |
salivary gland | 0 / 20155 | 0 | |
skin | 2 / 210574 | 9 | |
spleen | 2 / 53952 | 37 | |
stomach | 9 / 96619 | 93 | |
testis | 38 / 330442 | 114 | |
thymus | 8 / 81131 | 98 | |
thyroid | 15 / 47473 | 315 | |
tonsil | 0 / 16999 | 0 | |
trachea | 9 / 52413 | 171 | |
umbilical cord | 1 / 13680 | 73 | |
uterus | 23 / 232878 | 98 | |
vascular | 5 / 51780 | 96 |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 202085_at
Cell line | Expression level | Expression bar |
---|---|---|
721_B_lymphoblasts | 212 | |
Adipocyte | 29.85 | |
AdrenalCortex | 6.7 | |
Adrenalgland | 5.6 | |
Amygdala | 194.3 | |
Appendix | 7.1 | |
AtrioventricularNode | 7.3 | |
BDCA4+_DentriticCells | 19.05 | |
Bonemarrow | 6 | |
BronchialEpithelialCells | 149.4 | |
CD105+_Endothelial | 59.55 | |
CD14+_Monocytes | 14.3 | |
CD19+_BCells(neg._sel.) | 6.15 | |
CD33+_Myeloid | 11.6 | |
CD34+ | 29.4 | |
CD4+_Tcells | 6 | |
CD56+_NKCells | 7.65 | |
CD71+_EarlyErythroid | 35.55 | |
CD8+_Tcells | 5.2 | |
CardiacMyocytes | 12.9 | |
Caudatenucleus | 51.35 | |
Cerebellum | 28.45 | |
CerebellumPeduncles | 28.8 | |
CiliaryGanglion | 8.7 | |
CingulateCortex | 11 | |
Colorectaladenocarcinoma | 213.65 | |
DorsalRootGanglion | 7.85 | |
FetalThyroid | 78.1 | |
Fetalbrain | 5.95 | |
Fetalliver | 28.55 | |
Fetallung | 140.7 | |
GlobusPallidus | 4.75 | |
Heart | 8.85 | |
Hypothalamus | 136.05 | |
Kidney | 26.35 | |
Leukemia_chronicMyelogenousK-562 | 15.4 | |
Leukemia_promyelocytic-HL-60 | 6.75 | |
Leukemialymphoblastic(MOLT-4) | 4.85 | |
Liver | 17 | |
Lung | 85.35 | |
Lymphnode | 6.05 | |
Lymphoma_burkitts(Daudi) | 14.2 | |
Lymphoma_burkitts(Raji) | 20 | |
MedullaOblongata | 20.75 | |
OccipitalLobe | 37.25 | |
OlfactoryBulb | 155.95 | |
Ovary | 4.3 | |
Pancreas | 41.25 | |
PancreaticIslet | 23.1 | |
ParietalLobe | 27.05 | |
Pituitary | 6.75 | |
Placenta | 137.95 | |
Pons | 7.65 | |
PrefrontalCortex | 71.95 | |
Prostate | 42.55 | |
Salivarygland | 20.45 | |
SkeletalMuscle | 7.9 | |
Skin | 5.65 | |
SmoothMuscle | 26.4 | |
Spinalcord | 793.2 | |
SubthalamicNucleus | 10.7 | |
SuperiorCervicalGanglion | 7.85 | |
TemporalLobe | 5.45 | |
Testis | 84.6 | |
TestisGermCell | 76.55 | |
TestisIntersitial | 20.45 | |
TestisLeydigCell | 18.55 | |
TestisSeminiferousTubule | 28.8 | |
Thalamus | 34.55 | |
Thymus | 64.3 | |
Thyroid | 261.45 | |
Tongue | 8.95 | |
Tonsil | 16.75 | |
Trachea | 48.3 | |
TrigeminalGanglion | 7.6 | |
Uterus | 18.45 | |
UterusCorpus | 5.5 | |
WholeBlood | 8.8 | |
Wholebrain | 65.3 | |
colon | 134.55 | |
pineal_day | 93.78 | |
pineal_night | 27.96 | |
retina | 319.025 | |
small_intestine | 159.5 |
Human Whole Brain Microarrayview in Allen Brain Atlas
- Probe name: A_24_P201153
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue | Expression(mean ± stddev) | Expression Bar |
---|---|---|
Amygdala | 4.73 ± 0.75 | |
Basal Forebrain | 5.3 ± 0.74 | |
Basal Part of Pons | 5.06 ± 0.5 | |
Cerebellar Cortex | 5.23 ± 0.81 | |
Cerebellar Nuclei | 5.58 ± 0.73 | |
Claustrum | 4.39 ± 0.83 | |
Epithalamus | 6.52 ± 0.68 | |
Frontal Lobe | 4.91 ± 0.85 | |
Globus Pallidus | 6.5 ± 0.7 | |
Hypothalamus | 5.41 ± 1.16 | |
Insula | 4.81 ± 0.55 | |
Limbic Lobe | 4.86 ± 0.96 | |
Mesencephalon | 5.09 ± 0.87 | |
Myelencephalon | 5.21 ± 0.69 | |
Occipital Lobe | 5.03 ± 0.56 | |
Parietal Lobe | 4.71 ± 0.96 | |
Pontine Tegmentum | 5.07 ± 0.57 | |
Striatum | 5.2 ± 0.85 | |
Subthalamus | 4.5 ± 0.64 | |
Temporal Lobe | 4.79 ± 0.76 | |
Thalamus | 5.24 ± 0.53 | |
White Matter | 7.53 ± 0.48 |
Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
---|---|---|---|---|
Tjp2 | CB | Cerebellum | 17.72 | |
36.32 | ||||
Tjp2 | CTX | Cerebral cortex | 3.11 | |
2.38 | ||||
Tjp2 | HIP | Hippocampal region | 1.74 | |
1.72 | ||||
Tjp2 | HPF | Hippocampal formation | 1.57 | |
1.42 | ||||
Tjp2 | HY | Hypothalamus | 0.64 | |
0.43 | ||||
Tjp2 | LSX | Lateral septal complex | 0.34 | |
0.36 | ||||
Tjp2 | MB | Midbrain | 2.14 | |
1.98 | ||||
Tjp2 | MY | Medulla | 2.34 | |
2.51 | ||||
Tjp2 | OLF | Olfactory bulb | 1.63 | |
2.4 | ||||
Tjp2 | P | Pons | 1.28 | |
1.17 | ||||
Tjp2 | PAL | Pallidum | 1.51 | |
1.07 | ||||
Tjp2 | RHP | Retrohippocampal region | 1.27 | |
0.97 | ||||
Tjp2 | sAMY | Striatum-like amygdalar nuclei | 0.6 | |
0.42 | ||||
Tjp2 | STR | Striatum | 2 | |
1.38 | ||||
Tjp2 | STRd | Striatum dorsal region | 2.95 | |
2.1 | ||||
Tjp2 | STRv | Striatum ventral region | 0.77 | |
0.4 | ||||
Tjp2 | TH | Thalamus | 2.33 | |
1.71 |
Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
---|---|---|---|---|---|
PAp00007154 | 17 | 611 | 627 | SHFECEKETPQSLAFTR | Peptide Atlas |
ZO2_HUMAN_1168 | 9 | 1168 | 1176 | QQLSEHSKR | PRIDE |
ZO2_HUMAN_139 | 11 | 139 | 149 | AFEVMDEFDGR | PRIDE |
ZO2_HUMAN_301 | 12 | 301 | 312 | GRPGPIGVLLMK | PRIDE |
ZO2_HUMAN_554 | 11 | 554 | 564 | QILKVNTQDFR | PRIDE |
ZO2_HUMAN_564 | 27 | 564 | 590 | GLVREDAVLYLLEIPKGEMVTILAQSR | PRIDE |
ZO2_HUMAN_665 | 12 | 665 | 676 | AEQMASVQNAQR | PRIDE |