Annotation Detail for CD34
Basic Information Top
| Gene Symbol: | CD34 ( - ) |
|---|---|
| Gene Full Name: | CD34 molecule |
| Band: | 1q32.2 |
| Quick Links | Entrez ID:947; OMIM: 142230; Uniprot ID:CD34_HUMAN; ENSEMBL ID: ENSG00000174059; HGNC ID: 1662 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.374990
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 42 / 564012 | 74 |  |
| neonate | 3 / 31097 | 96 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 118 / 1939121 | 60 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 4 / 94178 | 42 |  |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 5 / 82823 | 60 | |
| colorectal tumor | 1 / 114246 | 8 |  |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 1 / 119369 | 8 | |
| germ cell tumor | 4 / 263845 | 15 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 5 / 68959 | 72 | |
| leukemia | 6 / 95842 | 62 | |
| liver tumor | 2 / 96359 | 20 | |
| lung tumor | 4 / 103127 | 38 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 330 / 3360307 | 98 | |
| ovarian tumor | 4 / 76682 | 52 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 1 / 102680 | 9 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 5 / 125191 | 39 | |
| uterine tumor | 4 / 90257 | 44 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 2 / 13106 | 152 | |
| adrenal gland | 4 / 33197 | 120 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 1 / 29757 | 33 | |
| blood | 1 / 123478 | 8 | |
| bone | 3 / 71655 | 41 | |
| bone marrow | 11 / 48801 | 225 |  |
| brain | 42 / 1100989 | 38 | |
| cervix | 3 / 48171 | 62 | |
| connective tissue | 6 / 149255 | 40 | |
| ear | 2 / 16212 | 123 | |
| embryonic tissue | 0 / 215722 | 0 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 6 / 211054 | 28 | |
| heart | 35 / 89626 | 390 | |
| intestine | 26 / 234472 | 110 | |
| kidney | 24 / 211777 | 113 | |
| larynx | 0 / 24145 | 0 | |
| liver | 3 / 207743 | 14 | |
| lung | 14 / 336974 | 41 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 7 / 153271 | 45 | |
| mouth | 8 / 67052 | 119 | |
| muscle | 6 / 107715 | 55 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 5 / 102051 | 48 | |
| pancreas | 7 / 214812 | 32 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 58 / 280825 | 206 | |
| prostate | 21 / 189345 | 110 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 3 / 210574 | 14 | |
| spleen | 16 / 53952 | 296 | |
| stomach | 9 / 96619 | 93 | |
| testis | 11 / 330442 | 33 | |
| thymus | 7 / 81131 | 86 | |
| thyroid | 9 / 47473 | 189 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 10 / 52413 | 190 | |
| umbilical cord | 3 / 13680 | 219 | |
| uterus | 43 / 232878 | 184 | |
| vascular | 18 / 51780 | 347 | |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 209543_s_at
| Cell line | Expression level | Expression bar |
|---|---|---|
| ||
| 721_B_lymphoblasts | 4.6 | |
| Adipocyte | 6.35 | |
| AdrenalCortex | 3.8 | |
| Adrenalgland | 3.2 | |
| Amygdala | 3.9 | |
| Appendix | 4.55 | |
| AtrioventricularNode | 2.8 | |
| BDCA4+_DentriticCells | 4 | |
| Bonemarrow | 3.6 | |
| BronchialEpithelialCells | 3.65 | |
| CD105+_Endothelial | 3.8 | |
| CD14+_Monocytes | 3.9 | |
| CD19+_BCells(neg._sel.) | 3.9 | |
| CD33+_Myeloid | 4.75 | |
| CD34+ | 34.05 | |
| CD4+_Tcells | 4.1 | |
| CD56+_NKCells | 4.35 | |
| CD71+_EarlyErythroid | 3.45 | |
| CD8+_Tcells | 3.6 | |
| CardiacMyocytes | 4.7 | |
| Caudatenucleus | 3.3 | |
| Cerebellum | 3 | |
| CerebellumPeduncles | 4.1 | |
| CiliaryGanglion | 2.6 | |
| CingulateCortex | 3.75 | |
| Colorectaladenocarcinoma | 3.65 | |
| DorsalRootGanglion | 2.75 | |
| FetalThyroid | 5.1 | |
| Fetalbrain | 3.65 | |
| Fetalliver | 3.15 | |
| Fetallung | 5.8 | |
| GlobusPallidus | 2.7 | |
| Heart | 4.65 | |
| Hypothalamus | 4 | |
| Kidney | 2.95 | |
| Leukemia_chronicMyelogenousK-562 | 3.35 | |
| Leukemia_promyelocytic-HL-60 | 3.25 | |
| Leukemialymphoblastic(MOLT-4) | 3 | |
| Liver | 4.75 | |
| Lung | 4.15 | |
| Lymphnode | 4.15 | |
| Lymphoma_burkitts(Daudi) | 4.65 | |
| Lymphoma_burkitts(Raji) | 5.1 | |
| MedullaOblongata | 3.35 | |
| OccipitalLobe | 3.25 | |
| OlfactoryBulb | 2.95 | |
| Ovary | 2.6 | |
| Pancreas | 2.95 | |
| PancreaticIslet | 3.95 | |
| ParietalLobe | 3.8 | |
| Pituitary | 4.3 | |
| Placenta | 93.6 | |
| Pons | 3.45 | |
| PrefrontalCortex | 4.7 | |
| Prostate | 4.4 | |
| Salivarygland | 2.95 | |
| SkeletalMuscle | 4.15 | |
| Skin | 2.8 | |
| SmoothMuscle | 4.2 | |
| Spinalcord | 3.9 | |
| SubthalamicNucleus | 3.3 | |
| SuperiorCervicalGanglion | 4.35 | |
| TemporalLobe | 3.3 | |
| Testis | 3.2 | |
| TestisGermCell | 3.9 | |
| TestisIntersitial | 3.1 | |
| TestisLeydigCell | 3.8 | |
| TestisSeminiferousTubule | 3.2 | |
| Thalamus | 3.7 | |
| Thymus | 2.95 | |
| Thyroid | 5.85 | |
| Tongue | 3.55 | |
| Tonsil | 3.6 | |
| Trachea | 3.1 | |
| TrigeminalGanglion | 3.95 | |
| Uterus | 3.2 | |
| UterusCorpus | 3.25 | |
| WholeBlood | 4 | |
| Wholebrain | 3.05 | |
| colon | 3.7 | |
| pineal_day | 4.6 | |
| pineal_night | 4.52 | |
| retina | 4.5 | |
| small_intestine | 3.6 | |
- Probe name: A_23_P23829
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.11 ± 0.46 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.64 ± 0.38 | |
| Basal Part of Pons | 3.93 ± 0.35 | |
| Cerebellar Cortex | 4.07 ± 0.46 | |
| Cerebellar Nuclei | 6.06 ± 0.46 | |
| Claustrum | 4.95 ± 1.13 | |
| Epithalamus | 4.06 ± 0.72 | |
| Frontal Lobe | 4.6 ± 0.74 | |
| Globus Pallidus | 6.01 ± 0.26 | |
| Hypothalamus | 4.68 ± 0.73 | |
| Insula | 4.31 ± 0.62 | |
| Limbic Lobe | 4.51 ± 0.84 | |
| Mesencephalon | 5.1 ± 0.65 | |
| Myelencephalon | 4.85 ± 0.69 | |
| Occipital Lobe | 4.95 ± 0.73 | |
| Parietal Lobe | 4.76 ± 0.74 | |
| Pontine Tegmentum | 4.87 ± 0.8 | |
| Striatum | 5.59 ± 0.61 | |
| Subthalamus | 5.14 ± 0.06 | |
| Temporal Lobe | 4.33 ± 0.69 | |
| Thalamus | 5.06 ± 0.51 | |
| White Matter | 5.82 ± 0.57 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Cd34 | CB | Cerebellum | 58.23 | |
| 91.43 | | |||
| Cd34 | CTX | Cerebral cortex | 100 | |
| 100 | | |||
| Cd34 | HIP | Hippocampal region | 100 | |
| 100 | | |||
| Cd34 | HPF | Hippocampal formation | 100 | |
| 100 | | |||
| Cd34 | HY | Hypothalamus | 74.29 | |
| 81.03 | | |||
| Cd34 | LSX | Lateral septal complex | 76.82 | |
| 72.69 | | |||
| Cd34 | MB | Midbrain | 93.76 | |
| 100 | | |||
| Cd34 | MY | Medulla | 82.37 | |
| 100 | | |||
| Cd34 | OLF | Olfactory bulb | 91.07 | |
| 100 | | |||
| Cd34 | P | Pons | 86.84 | |
| 100 | | |||
| Cd34 | PAL | Pallidum | 65.42 | |
| 79.37 | | |||
| Cd34 | RHP | Retrohippocampal region | 100 | |
| 100 | | |||
| Cd34 | sAMY | Striatum-like amygdalar nuclei | 94.32 | |
| 92.31 | | |||
| Cd34 | STR | Striatum | 61.55 | |
| 58.39 | | |||
| Cd34 | STRd | Striatum dorsal region | 50.8 | |
| 47.78 | | |||
| Cd34 | STRv | Striatum ventral region | 77.81 | |
| 73.95 | | |||
| Cd34 | TH | Thalamus | 87.95 | |
| 93.34 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp01363439 | 20 | 270 | 289 | LGILDFTEQDVASHQSYSQK | Peptide Atlas |