Annotation Detail for CD38
Basic Information Top
| Gene Symbol: | CD38 ( T10 ) |
|---|---|
| Gene Full Name: | CD38 molecule |
| Band: | 4p15.32 |
| Quick Links | Entrez ID:952; OMIM: 107270; Uniprot ID:CD38_HUMAN; ENSEMBL ID: ENSG00000004468; HGNC ID: 1667 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.479214
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 11 / 564012 | 19 |  |
| neonate | 1 / 31097 | 32 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 3 / 55556 | 53 |  |
| adult | 10 / 1939121 | 5 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 4 / 263845 | 15 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 1 / 136302 | 7 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 5 / 95842 | 52 | |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 7 / 71755 | 97 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 58 / 3360307 | 17 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 2 / 125680 | 15 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 5 / 123478 | 40 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 3 / 48801 | 61 | |
| brain | 5 / 1100989 | 4 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 0 / 215722 | 0 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 0 / 211054 | 0 | |
| heart | 5 / 89626 | 55 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 0 / 211777 | 0 | |
| larynx | 0 / 24145 | 0 | |
| liver | 2 / 207743 | 9 | |
| lung | 2 / 336974 | 5 | |
| lymph | 3 / 44270 | 67 | |
| lymph node | 13 / 91610 | 141 | |
| mammary gland | 0 / 153271 | 0 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 2 / 107715 | 18 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 1 / 214812 | 4 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 2 / 41328 | 48 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 8 / 189345 | 42 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 5 / 53952 | 92 | |
| stomach | 0 / 96619 | 0 | |
| testis | 5 / 330442 | 15 | |
| thymus | 10 / 81131 | 123 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 1 / 16999 | 58 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 0 / 232878 | 0 | |
| vascular | 0 / 51780 | 0 |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 205692_s_at
| Cell line | Expression level | Expression bar |
|---|---|---|
| ||
| 721_B_lymphoblasts | 7 | |
| Adipocyte | 5.75 | |
| AdrenalCortex | 6.3 | |
| Adrenalgland | 5.05 | |
| Amygdala | 6.45 | |
| Appendix | 6.5 | |
| AtrioventricularNode | 5 | |
| BDCA4+_DentriticCells | 266.5 |  |
| Bonemarrow | 16.45 | |
| BronchialEpithelialCells | 5.9 | |
| CD105+_Endothelial | 8.75 | |
| CD14+_Monocytes | 6.4 | |
| CD19+_BCells(neg._sel.) | 15.35 | |
| CD33+_Myeloid | 10.15 | |
| CD34+ | 78.7 | |
| CD4+_Tcells | 11.8 | |
| CD56+_NKCells | 171.3 | |
| CD71+_EarlyErythroid | 5.55 | |
| CD8+_Tcells | 6.55 | |
| CardiacMyocytes | 7.65 | |
| Caudatenucleus | 5.3 | |
| Cerebellum | 4.85 | |
| CerebellumPeduncles | 7.3 | |
| CiliaryGanglion | 3.6 | |
| CingulateCortex | 6.1 | |
| Colorectaladenocarcinoma | 6.1 | |
| DorsalRootGanglion | 5 | |
| FetalThyroid | 5.8 | |
| Fetalbrain | 8.95 | |
| Fetalliver | 5.25 | |
| Fetallung | 5.1 | |
| GlobusPallidus | 7.65 | |
| Heart | 7.9 | |
| Hypothalamus | 6.35 | |
| Kidney | 4.65 | |
| Leukemia_chronicMyelogenousK-562 | 5.4 | |
| Leukemia_promyelocytic-HL-60 | 84.1 | |
| Leukemialymphoblastic(MOLT-4) | 48.6 | |
| Liver | 7.95 | |
| Lung | 7.2 | |
| Lymphnode | 36.6 | |
| Lymphoma_burkitts(Daudi) | 401.4 | |
| Lymphoma_burkitts(Raji) | 126.3 | |
| MedullaOblongata | 5.3 | |
| OccipitalLobe | 5.3 | |
| OlfactoryBulb | 5.3 | |
| Ovary | 4.6 | |
| Pancreas | 4.85 | |
| PancreaticIslet | 6.5 | |
| ParietalLobe | 5.65 | |
| Pituitary | 6.95 | |
| Placenta | 6.05 | |
| Pons | 5.9 | |
| PrefrontalCortex | 7.65 | |
| Prostate | 105.75 | |
| Salivarygland | 4.9 | |
| SkeletalMuscle | 7.15 | |
| Skin | 6.4 | |
| SmoothMuscle | 7.4 | |
| Spinalcord | 6 | |
| SubthalamicNucleus | 4.65 | |
| SuperiorCervicalGanglion | 6.95 | |
| TemporalLobe | 5.5 | |
| Testis | 5.05 | |
| TestisGermCell | 4.8 | |
| TestisIntersitial | 5.1 | |
| TestisLeydigCell | 5.95 | |
| TestisSeminiferousTubule | 5.05 | |
| Thalamus | 5.4 | |
| Thymus | 175.7 | |
| Thyroid | 10.5 | |
| Tongue | 6 | |
| Tonsil | 20.1 | |
| Trachea | 8.55 | |
| TrigeminalGanglion | 10.85 | |
| Uterus | 5.8 | |
| UterusCorpus | 5.4 | |
| WholeBlood | 6.55 | |
| Wholebrain | 5.1 | |
| colon | 6.05 | |
| pineal_day | 7.7 | |
| pineal_night | 7.2 | |
| retina | 7.3 | |
| small_intestine | 12.6 | |
- Probe name: CUST_14657_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.89 ± 0.62 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 5.82 ± 0.51 | |
| Basal Part of Pons | 4.32 ± 0.43 | |
| Cerebellar Cortex | 4.56 ± 0.34 | |
| Cerebellar Nuclei | 4.57 ± 0.94 | |
| Claustrum | 5.17 ± 0.91 | |
| Epithalamus | 5.85 ± 0.58 | |
| Frontal Lobe | 5.31 ± 0.62 | |
| Globus Pallidus | 7.27 ± 0.56 | |
| Hypothalamus | 5.92 ± 0.44 | |
| Insula | 4.98 ± 0.43 | |
| Limbic Lobe | 5.14 ± 0.76 | |
| Mesencephalon | 5.61 ± 0.79 | |
| Myelencephalon | 5.34 ± 0.8 | |
| Occipital Lobe | 5.12 ± 0.56 | |
| Parietal Lobe | 5.06 ± 0.65 | |
| Pontine Tegmentum | 5.56 ± 0.46 | |
| Striatum | 6.46 ± 0.67 | |
| Subthalamus | 4.99 ± 0.72 | |
| Temporal Lobe | 4.76 ± 0.58 | |
| Thalamus | 5.77 ± 0.44 | |
| White Matter | 6.34 ± 0.54 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Cd38 | CB | Cerebellum | 1.11 | |
| 1.61 | | |||
| Cd38 | CTX | Cerebral cortex | 0.37 | |
| 0.54 | | |||
| Cd38 | HIP | Hippocampal region | 0.28 | |
| 0.47 | | |||
| Cd38 | HPF | Hippocampal formation | 0.32 | |
| 0.6 | | |||
| Cd38 | HY | Hypothalamus | 0.3 | |
| 0.38 | | |||
| Cd38 | LSX | Lateral septal complex | 0.64 | |
| 0.97 | | |||
| Cd38 | MB | Midbrain | 0.32 | |
| 0.72 | | |||
| Cd38 | MY | Medulla | 0.46 | |
| 0.96 | | |||
| Cd38 | OLF | Olfactory bulb | 0.7 | |
| 0.6 | | |||
| Cd38 | P | Pons | 0.37 | |
| 0.55 | | |||
| Cd38 | PAL | Pallidum | 0.36 | |
| 0.5 | | |||
| Cd38 | RHP | Retrohippocampal region | 0.41 | |
| 0.81 | | |||
| Cd38 | sAMY | Striatum-like amygdalar nuclei | 0.35 | |
| 0.51 | | |||
| Cd38 | STR | Striatum | 0.33 | |
| 0.45 | | |||
| Cd38 | STRd | Striatum dorsal region | 0.27 | |
| 0.39 | | |||
| Cd38 | STRv | Striatum ventral region | 0.37 | |
| 0.36 | | |||
| Cd38 | TH | Thalamus | 0.56 | |
| 0.81 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00008558 | 13 | 235 | 247 | VQTLEAWVIHGGR | Peptide Atlas |