AutismKB 2.0

Annotation Detail for TECR


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Basic Information Top
Gene Symbol:TECR ( GPSN2,SC2,TER )
Gene Full Name: trans-2,3-enoyl-CoA reductase
Band: 19p13.12
Quick LinksEntrez ID:9524; OMIM: 610057; Uniprot ID:TECR_HUMAN; ENSEMBL ID: ENSG00000099797; HGNC ID: 4551
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body11 / 70761155
blastocyst6 / 6231996
fetus12 / 56401221
neonate0 / 310970 
infant0 / 236200 
juvenile4 / 5555671
adult213 / 1939121109
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor4 / 12794312
bladder carcinoma1 / 1747557
breast (mammary gland) tumor11 / 94178116
cervical tumor6 / 34366174
chondrosarcoma8 / 8282396
colorectal tumor13 / 114246113
esophageal tumor5 / 17290289
gastrointestinal tumor11 / 11936992
germ cell tumor15 / 26384556
glioma8 / 10688374
head and neck tumor7 / 13630251
kidney tumor3 / 6895943
leukemia8 / 9584283
liver tumor7 / 9635972
lung tumor11 / 103127106
lymphoma4 / 7175555
non-neoplasia4 / 9725041
normal238 / 336030770
ovarian tumor8 / 76682104
pancreatic tumor13 / 104616124
primitive neuroectodermal tumor of the CNS37 / 125680294
prostate cancer18 / 102680175
retinoblastoma11 / 46356237
skin tumor35 / 124949280
soft tissue/muscle tissue tumor29 / 125191231
uterine tumor2 / 9025722
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue4 / 13106305
adrenal gland5 / 33197150
ascites4 / 4001599
bladder2 / 2975767
blood7 / 12347856
bone5 / 7165569
bone marrow2 / 4880140
brain79 / 110098971
cervix15 / 48171311
connective tissue29 / 149255194
ear0 / 162120 
embryonic tissue32 / 215722148
esophagus5 / 20209247
eye30 / 211054142
heart5 / 8962655
intestine23 / 23447298
kidney11 / 21177751
larynx0 / 241450 
liver15 / 20774372
lung31 / 33697491
lymph2 / 4427045
lymph node1 / 9161010
mammary gland12 / 15327178
mouth2 / 6705229
muscle6 / 10771555
nerve0 / 157680 
ovary14 / 102051137
pancreas15 / 21481269
parathyroid2 / 2053997
pharynx4 / 4132896
pituitary gland2 / 16585120
placenta48 / 280825170
prostate23 / 189345121
salivary gland0 / 201550 
skin47 / 210574223
spleen1 / 5395218
stomach15 / 96619155
testis29 / 33044287
thymus2 / 8113124
thyroid3 / 4747363
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus6 / 23287825
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 208336_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts91.1
Adipocyte251.2
AdrenalCortex44.75
Adrenalgland74.85
Amygdala73.4
Appendix17.2
AtrioventricularNode16.85
BDCA4+_DentriticCells95.8
Bonemarrow37.9
BronchialEpithelialCells91.65
CD105+_Endothelial75.35
CD14+_Monocytes55.25
CD19+_BCells(neg._sel.)56.9
CD33+_Myeloid33.1
CD34+144.75
CD4+_Tcells143.35
CD56+_NKCells130.35
CD71+_EarlyErythroid55.2
CD8+_Tcells117.1
CardiacMyocytes28.2
Caudatenucleus56.55
Cerebellum87.85
CerebellumPeduncles245.05
CiliaryGanglion21.5
CingulateCortex80.5
Colorectaladenocarcinoma165.7
DorsalRootGanglion17.6
FetalThyroid60.75
Fetalbrain27.7
Fetalliver19.85
Fetallung49
GlobusPallidus25.25
Heart130.3
Hypothalamus229.1
Kidney84.15
Leukemia_chronicMyelogenousK-56281.25
Leukemia_promyelocytic-HL-6036.45
Leukemialymphoblastic(MOLT-4)88.4
Liver327.05
Lung124.3
Lymphnode40.85
Lymphoma_burkitts(Daudi)76.8
Lymphoma_burkitts(Raji)58.1
MedullaOblongata62.05
OccipitalLobe66.5
OlfactoryBulb51.25
Ovary9.85
Pancreas35.55
PancreaticIslet56
ParietalLobe78.45
Pituitary45.45
Placenta377.45
Pons45.95
PrefrontalCortex182.1
Prostate269.55
Salivarygland21.05
SkeletalMuscle43.9
Skin22.4
SmoothMuscle22.5
Spinalcord169.15
SubthalamicNucleus34.45
SuperiorCervicalGanglion16.5
TemporalLobe40.3
Testis159.25
TestisGermCell149.7
TestisIntersitial143.75
TestisLeydigCell95.5
TestisSeminiferousTubule115.3
Thalamus184.25
Thymus73.45
Thyroid161.1
Tongue153
Tonsil44.05
Trachea46.65
TrigeminalGanglion17.2
Uterus41.95
UterusCorpus14.45
WholeBlood31.4
Wholebrain215.2
colon72.25
pineal_day429.96
pineal_night397.98
retina98.6
small_intestine66.6
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Gpsn2CBCerebellum100
100
Gpsn2CTXCerebral cortex100
100
Gpsn2HIPHippocampal region100
100
Gpsn2HPFHippocampal formation100
100
Gpsn2HYHypothalamus100
100
Gpsn2LSXLateral septal complex100
100
Gpsn2MBMidbrain100
100
Gpsn2MYMedulla100
100
Gpsn2OLFOlfactory bulb100
100
Gpsn2PPons100
100
Gpsn2PALPallidum100
100
Gpsn2RHPRetrohippocampal region100
100
Gpsn2sAMYStriatum-like amygdalar nuclei100
100
Gpsn2STRStriatum100
100
Gpsn2STRdStriatum dorsal region100
100
Gpsn2STRvStriatum ventral region100
100
Gpsn2THThalamus100
100
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00002104 19 15 33 EKLCFLDKVEPHATIAEIK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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