AutismKB 2.0

Annotation Detail for RAB36


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Basic Information Top
Gene Symbol:RAB36 ( - )
Gene Full Name: RAB36, member RAS oncogene family
Band: 22q11.23
Quick LinksEntrez ID:9609; OMIM: 605662; Uniprot ID:RAB36_HUMAN; ENSEMBL ID: ENSG00000100228; HGNC ID: 9775
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst0 / 623190 
fetus4 / 5640127
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult24 / 193912112
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma3 / 8282336
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor2 / 11936916
germ cell tumor1 / 2638453
glioma3 / 10688328
head and neck tumor0 / 1363020 
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia5 / 9725051
normal30 / 33603078
ovarian tumor0 / 766820 
pancreatic tumor2 / 10461619
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer1 / 1026809
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor1 / 1251917
uterine tumor2 / 9025722
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites2 / 4001549
bladder0 / 297570 
blood0 / 1234780 
bone0 / 716550 
bone marrow0 / 488010 
brain14 / 110098912
cervix0 / 481710 
connective tissue2 / 14925513
ear0 / 162120 
embryonic tissue1 / 2157224
esophagus0 / 202090 
eye4 / 21105418
heart0 / 896260 
intestine0 / 2344720 
kidney2 / 2117779
larynx0 / 241450 
liver0 / 2077430 
lung5 / 33697414
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary0 / 1020510 
pancreas10 / 21481246
parathyroid1 / 2053948
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta2 / 2808257
prostate1 / 1893455
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach0 / 966190 
testis1 / 3304423
thymus0 / 811310 
thyroid1 / 4747321
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus3 / 23287812
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 211471_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts4
Adipocyte3.1
AdrenalCortex3.25
Adrenalgland2.95
Amygdala3.6
Appendix4.35
AtrioventricularNode2.4
BDCA4+_DentriticCells3.6
Bonemarrow3.05
BronchialEpithelialCells3.1
CD105+_Endothelial3.15
CD14+_Monocytes3.4
CD19+_BCells(neg._sel.)3.4
CD33+_Myeloid4.1
CD34+4
CD4+_Tcells3.45
CD56+_NKCells3.8
CD71+_EarlyErythroid3
CD8+_Tcells3.1
CardiacMyocytes3.9
Caudatenucleus2.85
Cerebellum2.55
CerebellumPeduncles3.5
CiliaryGanglion2.3
CingulateCortex3.85
Colorectaladenocarcinoma3.65
DorsalRootGanglion2.75
FetalThyroid6.45
Fetalbrain3.2
Fetalliver2.65
Fetallung3
GlobusPallidus2.55
Heart3.9
Hypothalamus3.6
Kidney2.55
Leukemia_chronicMyelogenousK-5622.85
Leukemia_promyelocytic-HL-602.8
Leukemialymphoblastic(MOLT-4)2.55
Liver4.05
Lung3.55
Lymphnode2.75
Lymphoma_burkitts(Daudi)4
Lymphoma_burkitts(Raji)4.35
MedullaOblongata3.2
OccipitalLobe3.5
OlfactoryBulb3.45
Ovary2.15
Pancreas2.7
PancreaticIslet3.35
ParietalLobe3.3
Pituitary5.05
Placenta4.7
Pons3.2
PrefrontalCortex4.3
Prostate3.75
Salivarygland2.55
SkeletalMuscle3.45
Skin3.3
SmoothMuscle3.6
Spinalcord4.35
SubthalamicNucleus3
SuperiorCervicalGanglion3.95
TemporalLobe2.9
Testis2.75
TestisGermCell2.7
TestisIntersitial2.65
TestisLeydigCell3.1
TestisSeminiferousTubule3
Thalamus3.35
Thymus2.5
Thyroid9.75
Tongue3.15
Tonsil3.15
Trachea2.6
TrigeminalGanglion3.85
Uterus2.6
UterusCorpus2.85
WholeBlood3.5
Wholebrain2.9
colon3.15
pineal_day4.02
pineal_night3.92
retina3.825
small_intestine3.05
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_1570_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala1.69 ± 1
Basal Forebrain1.23 ± 0.25
Basal Part of Pons1.01 ± 0.36
Cerebellar Cortex1.05 ± 0.61
Cerebellar Nuclei1.53 ± 0.7
Claustrum1.8 ± 0.63
Epithalamus1.84 ± 0.63
Frontal Lobe1.33 ± 0.7
Globus Pallidus1.73 ± 0.75
Hypothalamus1.28 ± 0.74
Insula1.33 ± 0.83
Limbic Lobe1.44 ± 0.56
Mesencephalon1.47 ± 0.67
Myelencephalon1.37 ± 0.66
Occipital Lobe1.13 ± 0.54
Parietal Lobe1.27 ± 0.6
Pontine Tegmentum1.42 ± 0.67
Striatum1.36 ± 0.61
Subthalamus1.41 ± 0.6
Temporal Lobe1.37 ± 0.75
Thalamus1.21 ± 0.65
White Matter1.51 ± 0.17
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Rab36CBCerebellum9.47
9.92
Rab36CTXCerebral cortex15.44
10.53
Rab36HIPHippocampal region9.6
8.01
Rab36HPFHippocampal formation10.77
8.25
Rab36HYHypothalamus7.44
4.97
Rab36LSXLateral septal complex11.4
7.22
Rab36MBMidbrain8.61
7.13
Rab36MYMedulla22.01
20.17
Rab36OLFOlfactory bulb14.05
9.31
Rab36PPons16.9
15.19
Rab36PALPallidum5.18
4.04
Rab36RHPRetrohippocampal region12.4
8.36
Rab36sAMYStriatum-like amygdalar nuclei10.41
6.78
Rab36STRStriatum6.15
4.12
Rab36STRdStriatum dorsal region3.4
2.48
Rab36STRvStriatum ventral region11.23
6.71
Rab36THThalamus4.54
3.83
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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