AutismKB 2.0

Annotation Detail for TTC37


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Basic Information Top
Gene Symbol:TTC37 ( KIAA0372,MGC32587 )
Gene Full Name: tetratricopeptide repeat domain 37
Band: 5q15
Quick LinksEntrez ID:9652; OMIM: NA; Uniprot ID:TTC37_HUMAN; ENSEMBL ID: ENSG00000198677; HGNC ID: 23639
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body10 / 70761141
blastocyst13 / 62319208
fetus64 / 564012113
neonate4 / 31097128
infant1 / 2362042
juvenile7 / 55556125
adult118 / 193912160
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma5 / 17475286
breast (mammary gland) tumor8 / 9417884
cervical tumor1 / 3436629
chondrosarcoma7 / 8282384
colorectal tumor2 / 11424617
esophageal tumor1 / 1729057
gastrointestinal tumor8 / 11936967
germ cell tumor21 / 26384579
glioma2 / 10688318
head and neck tumor9 / 13630266
kidney tumor4 / 6895958
leukemia9 / 9584293
liver tumor11 / 96359114
lung tumor4 / 10312738
lymphoma4 / 7175555
non-neoplasia3 / 9725030
normal322 / 336030795
ovarian tumor4 / 7668252
pancreatic tumor2 / 10461619
primitive neuroectodermal tumor of the CNS9 / 12568071
prostate cancer6 / 10268058
retinoblastoma4 / 4635686
skin tumor11 / 12494988
soft tissue/muscle tissue tumor7 / 12519155
uterine tumor7 / 9025777
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland1 / 3319730
ascites5 / 40015124
bladder4 / 29757134
blood11 / 12347889
bone15 / 71655209
bone marrow4 / 4880181
brain99 / 110098989
cervix1 / 4817120
connective tissue11 / 14925573
ear1 / 1621261
embryonic tissue29 / 215722134
esophagus1 / 2020949
eye20 / 21105494
heart6 / 8962666
intestine11 / 23447246
kidney12 / 21177756
larynx0 / 241450 
liver20 / 20774396
lung23 / 33697468
lymph3 / 4427067
lymph node7 / 9161076
mammary gland8 / 15327152
mouth8 / 67052119
muscle7 / 10771564
nerve1 / 1576863
ovary5 / 10205148
pancreas5 / 21481223
parathyroid0 / 205390 
pharynx2 / 4132848
pituitary gland1 / 1658560
placenta21 / 28082574
prostate12 / 18934563
salivary gland1 / 2015549
skin20 / 21057494
spleen4 / 5395274
stomach3 / 9661931
testis11 / 33044233
thymus8 / 8113198
thyroid4 / 4747384
tonsil2 / 16999117
trachea15 / 52413286
umbilical cord0 / 136800 
uterus19 / 23287881
vascular8 / 51780154
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 203049_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts43.6
Adipocyte12.55
AdrenalCortex15.55
Adrenalgland10.7
Amygdala78.55
Appendix15.8
AtrioventricularNode11.9
BDCA4+_DentriticCells31.9
Bonemarrow13.35
BronchialEpithelialCells34.2
CD105+_Endothelial39.15
CD14+_Monocytes16.65
CD19+_BCells(neg._sel.)14.35
CD33+_Myeloid18.05
CD34+26.05
CD4+_Tcells22.5
CD56+_NKCells29.75
CD71+_EarlyErythroid11.85
CD8+_Tcells31.9
CardiacMyocytes25.15
Caudatenucleus11.15
Cerebellum9.6
CerebellumPeduncles14.9
CiliaryGanglion16.15
CingulateCortex12.6
Colorectaladenocarcinoma48.9
DorsalRootGanglion12.15
FetalThyroid13.25
Fetalbrain27.8
Fetalliver11.55
Fetallung10.15
GlobusPallidus11.25
Heart19.45
Hypothalamus30.2
Kidney10.7
Leukemia_chronicMyelogenousK-56212
Leukemia_promyelocytic-HL-6030.4
Leukemialymphoblastic(MOLT-4)10.85
Liver18.1
Lung12.6
Lymphnode14.75
Lymphoma_burkitts(Daudi)32.6
Lymphoma_burkitts(Raji)68.4
MedullaOblongata13.95
OccipitalLobe14.9
OlfactoryBulb14.65
Ovary8.85
Pancreas13.5
PancreaticIslet14.2
ParietalLobe15.7
Pituitary23.75
Placenta10.35
Pons12.5
PrefrontalCortex36.65
Prostate14.85
Salivarygland10.95
SkeletalMuscle17.45
Skin11.25
SmoothMuscle34
Spinalcord16.45
SubthalamicNucleus14.85
SuperiorCervicalGanglion20.3
TemporalLobe11.9
Testis9.75
TestisGermCell9.25
TestisIntersitial9.85
TestisLeydigCell13
TestisSeminiferousTubule9.9
Thalamus13.6
Thymus8.85
Thyroid78.65
Tongue13.8
Tonsil12.55
Trachea9.4
TrigeminalGanglion15
Uterus60.4
UterusCorpus11.85
WholeBlood15.1
Wholebrain10.85
colon24.05
pineal_day40.24
pineal_night48.92
retina13.975
small_intestine27
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_5804_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala9.37 ± 0.3
Basal Forebrain9.36 ± 0.18
Basal Part of Pons9.48 ± 0.22
Cerebellar Cortex9.57 ± 0.28
Cerebellar Nuclei9.67 ± 0.24
Claustrum9.79 ± 0.3
Epithalamus9.25 ± 0.22
Frontal Lobe9.36 ± 0.36
Globus Pallidus9.44 ± 0.18
Hypothalamus9.48 ± 0.48
Insula9.34 ± 0.22
Limbic Lobe9.4 ± 0.35
Mesencephalon9.42 ± 0.35
Myelencephalon9.36 ± 0.32
Occipital Lobe9.47 ± 0.23
Parietal Lobe9.38 ± 0.29
Pontine Tegmentum9.44 ± 0.3
Striatum9.11 ± 0.23
Subthalamus9.52 ± 0.27
Temporal Lobe9.35 ± 0.31
Thalamus9.4 ± 0.25
White Matter10.11 ± 0.22
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
AK129128CBCerebellum0
0
AK129128CTXCerebral cortex0
0
AK129128HIPHippocampal region0
0
AK129128HPFHippocampal formation0
0
AK129128HYHypothalamus0
0
AK129128LSXLateral septal complex0
0
AK129128MBMidbrain0
0
AK129128MYMedulla0
0
AK129128OLFOlfactory bulb0
0
AK129128PPons0
0
AK129128PALPallidum0
0
AK129128RHPRetrohippocampal region0
0
AK129128sAMYStriatum-like amygdalar nuclei0
0
AK129128STRStriatum0
0
AK129128STRdStriatum dorsal region0
0
AK129128STRvStriatum ventral region0
0
AK129128THThalamus0
0
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00001167 13 1162 1174 CLLTSAIYALQGR Peptide Atlas
TTC37_HUMAN_2 13 2 14 SSKEVKTALKSAR PRIDE

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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