Annotation Detail for LOC96610
Basic Information Top
| Gene Symbol: | LOC96610 ( - ) |
|---|---|
| Gene Full Name: | - |
| Band: | 22q11.22 |
| Quick Links | Entrez ID:96610; OMIM: NA; Uniprot ID:; ENSEMBL ID: ; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.449601
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 3 / 70761 | 42 |  |
| blastocyst | 3 / 62319 | 48 | |
| fetus | 15 / 564012 | 26 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 67 / 1939121 | 34 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 2 / 12794 | 156 |  |
| bladder carcinoma | 2 / 17475 | 114 | |
| breast (mammary gland) tumor | 4 / 94178 | 42 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 4 / 114246 | 35 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 5 / 263845 | 18 | |
| glioma | 8 / 106883 | 74 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 5 / 95842 | 52 | |
| liver tumor | 7 / 96359 | 72 | |
| lung tumor | 2 / 103127 | 19 | |
| lymphoma | 2 / 71755 | 27 | |
| non-neoplasia | 6 / 97250 | 61 | |
| normal | 106 / 3360307 | 31 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 3 / 102680 | 29 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 5 / 124949 | 40 | |
| soft tissue/muscle tissue tumor | 3 / 125191 | 23 | |
| uterine tumor | 3 / 90257 | 33 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 2 / 33197 | 60 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 2 / 29757 | 67 | |
| blood | 6 / 123478 | 48 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 3 / 48801 | 61 | |
| brain | 37 / 1100989 | 33 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 2 / 149255 | 13 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 8 / 215722 | 37 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 1 / 211054 | 4 |  |
| heart | 1 / 89626 | 11 | |
| intestine | 9 / 234472 | 38 | |
| kidney | 3 / 211777 | 14 | |
| larynx | 0 / 24145 | 0 | |
| liver | 8 / 207743 | 38 | |
| lung | 10 / 336974 | 29 | |
| lymph | 2 / 44270 | 45 | |
| lymph node | 1 / 91610 | 10 | |
| mammary gland | 10 / 153271 | 65 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 9 / 107715 | 83 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 4 / 214812 | 18 | |
| parathyroid | 2 / 20539 | 97 | |
| pharynx | 9 / 41328 | 217 |  |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 5 / 280825 | 17 | |
| prostate | 4 / 189345 | 21 | |
| salivary gland | 2 / 20155 | 99 | |
| skin | 7 / 210574 | 33 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 3 / 96619 | 31 | |
| testis | 4 / 330442 | 12 | |
| thymus | 6 / 81131 | 73 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 1 / 16999 | 58 | |
| trachea | 2 / 52413 | 38 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 8 / 232878 | 34 | |
| vascular | 3 / 51780 | 57 | |
- Probe name: A_24_P76868
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.77 ± 0.99 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.56 ± 0.3 | |
| Basal Part of Pons | 5.23 ± 0.4 | |
| Cerebellar Cortex | 5.25 ± 0.32 | |
| Cerebellar Nuclei | 4.43 ± 0.52 | |
| Claustrum | 4.15 ± 0.77 | |
| Epithalamus | 5.1 ± 0.46 | |
| Frontal Lobe | 4.57 ± 0.52 | |
| Globus Pallidus | 4.2 ± 0.31 | |
| Hypothalamus | 4.75 ± 0.65 | |
| Insula | 4.45 ± 0.45 | |
| Limbic Lobe | 4.56 ± 0.62 | |
| Mesencephalon | 4.47 ± 0.63 | |
| Myelencephalon | 4.62 ± 0.57 | |
| Occipital Lobe | 5.14 ± 0.47 | |
| Parietal Lobe | 4.75 ± 0.36 | |
| Pontine Tegmentum | 4.5 ± 0.51 | |
| Striatum | 4.43 ± 0.4 | |
| Subthalamus | 4.46 ± 0.59 | |
| Temporal Lobe | 4.7 ± 0.45 | |
| Thalamus | 4.55 ± 0.48 | |
| White Matter | 5.2 ± 0.33 | |
Mouse Brain ISH 