AutismKB 2.0

Annotation Detail for ZSCAN12


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Basic Information Top
Gene Symbol:ZSCAN12 ( KIAA0426,ZFP96,ZNF29K1,ZNF305,ZNF96,dJ29K1.2 )
Gene Full Name: zinc finger and SCAN domain containing 12
Band: 6p22.1
Quick LinksEntrez ID:9753; OMIM: 603978; Uniprot ID:; ENSEMBL ID: ENSG00000158691; HGNC ID: 13172
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body3 / 7076142
blastocyst0 / 623190 
fetus8 / 56401214
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult20 / 193912110
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor1 / 9417810
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor1 / 1142468
esophageal tumor1 / 1729057
gastrointestinal tumor0 / 1193690 
germ cell tumor1 / 2638453
glioma0 / 1068830 
head and neck tumor9 / 13630266
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor2 / 10312719
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal31 / 33603079
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS2 / 12568015
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor4 / 12494932
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone0 / 716550 
bone marrow0 / 488010 
brain6 / 11009895
cervix0 / 481710 
connective tissue0 / 1492550 
ear1 / 1621261
embryonic tissue7 / 21572232
esophagus1 / 2020949
eye0 / 2110540 
heart1 / 8962611
intestine1 / 2344724
kidney0 / 2117770 
larynx7 / 24145289
liver1 / 2077434
lung3 / 3369748
lymph0 / 442700 
lymph node1 / 9161010
mammary gland1 / 1532716
mouth1 / 6705214
muscle3 / 10771527
nerve0 / 157680 
ovary0 / 1020510 
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta1 / 2808253
prostate1 / 1893455
salivary gland0 / 201550 
skin4 / 21057418
spleen0 / 539520 
stomach0 / 966190 
testis9 / 33044227
thymus1 / 8113112
thyroid1 / 4747321
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus0 / 2328780 
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 206507_at
Cell line Expression level Expression bar
721_B_lymphoblasts20.75
Adipocyte19.65
AdrenalCortex28.85
Adrenalgland20.35
Amygdala18.4
Appendix35.4
AtrioventricularNode28.6
BDCA4+_DentriticCells17.4
Bonemarrow27.35
BronchialEpithelialCells19.2
CD105+_Endothelial19.5
CD14+_Monocytes21.35
CD19+_BCells(neg._sel.)20.45
CD33+_Myeloid22.95
CD34+22.9
CD4+_Tcells19.9
CD56+_NKCells22.2
CD71+_EarlyErythroid19.5
CD8+_Tcells17.1
CardiacMyocytes32.5
Caudatenucleus18.65
Cerebellum17.4
CerebellumPeduncles26.3
CiliaryGanglion27.75
CingulateCortex22.85
Colorectaladenocarcinoma20.25
DorsalRootGanglion21
FetalThyroid21.65
Fetalbrain22
Fetalliver18
Fetallung14.95
GlobusPallidus17.85
Heart31.65
Hypothalamus21.4
Kidney21.25
Leukemia_chronicMyelogenousK-56218.9
Leukemia_promyelocytic-HL-6018.15
Leukemialymphoblastic(MOLT-4)14.85
Liver30.6
Lung22.25
Lymphnode16.4
Lymphoma_burkitts(Daudi)37.4
Lymphoma_burkitts(Raji)33.85
MedullaOblongata17.4
OccipitalLobe17.8
OlfactoryBulb17.15
Ovary17.7
Pancreas21.8
PancreaticIslet24.95
ParietalLobe28.4
Pituitary24.35
Placenta19.55
Pons21.3
PrefrontalCortex21.4
Prostate24.6
Salivarygland18.45
SkeletalMuscle41.15
Skin24.15
SmoothMuscle22.4
Spinalcord22.7
SubthalamicNucleus20.25
SuperiorCervicalGanglion44.15
TemporalLobe19.25
Testis17.6
TestisGermCell17
TestisIntersitial18.65
TestisLeydigCell24.3
TestisSeminiferousTubule18.4
Thalamus21.45
Thymus17.75
Thyroid23.85
Tongue25.25
Tonsil22.4
Trachea17
TrigeminalGanglion34
Uterus15.65
UterusCorpus29.95
WholeBlood21.35
Wholebrain15.3
colon18.55
pineal_day25
pineal_night23.9
retina23.475
small_intestine17.25
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_2683_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala6.38 ± 0.6
Basal Forebrain6.49 ± 0.42
Basal Part of Pons5.83 ± 0.41
Cerebellar Cortex5.88 ± 0.31
Cerebellar Nuclei6.49 ± 0.58
Claustrum6.16 ± 0.38
Epithalamus5.69 ± 0.77
Frontal Lobe6.27 ± 0.42
Globus Pallidus5.31 ± 0.67
Hypothalamus6.49 ± 0.52
Insula6.37 ± 0.36
Limbic Lobe6.23 ± 0.55
Mesencephalon6.06 ± 0.65
Myelencephalon6.2 ± 0.56
Occipital Lobe6.83 ± 0.45
Parietal Lobe6.47 ± 0.48
Pontine Tegmentum6.43 ± 0.38
Striatum6.11 ± 0.68
Subthalamus6.83 ± 0.47
Temporal Lobe6.38 ± 0.46
Thalamus5.9 ± 0.44
White Matter4.8 ± 0.31
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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