Annotation Detail for KIAA0101
Basic Information Top
Gene Symbol: | KIAA0101 ( NS5ATP9,OEATC-1,OEATC1,PAF,p15(PAF) ) |
---|---|
Gene Full Name: | KIAA0101 |
Band: | 15q22.31 |
Quick Links | Entrez ID:9768; OMIM: 610696; Uniprot ID:PAF_HUMAN; ENSEMBL ID: ENSG00000166803; HGNC ID: |
Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.81892
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
embryoid body | 3 / 70761 | 42 | |
blastocyst | 1 / 62319 | 16 | |
fetus | 45 / 564012 | 79 | |
neonate | 1 / 31097 | 32 | |
infant | 9 / 23620 | 381 | |
juvenile | 3 / 55556 | 53 | |
adult | 82 / 1939121 | 42 |
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
adrenal tumor | 1 / 12794 | 78 | |
bladder carcinoma | 24 / 17475 | 1373 | |
breast (mammary gland) tumor | 2 / 94178 | 21 | |
cervical tumor | 10 / 34366 | 290 | |
chondrosarcoma | 4 / 82823 | 48 | |
colorectal tumor | 3 / 114246 | 26 | |
esophageal tumor | 0 / 17290 | 0 | |
gastrointestinal tumor | 15 / 119369 | 125 | |
germ cell tumor | 110 / 263845 | 416 | |
glioma | 13 / 106883 | 121 | |
head and neck tumor | 4 / 136302 | 29 | |
kidney tumor | 10 / 68959 | 145 | |
leukemia | 41 / 95842 | 427 | |
liver tumor | 10 / 96359 | 103 | |
lung tumor | 7 / 103127 | 67 | |
lymphoma | 5 / 71755 | 69 | |
non-neoplasia | 0 / 97250 | 0 | |
normal | 159 / 3360307 | 47 | |
ovarian tumor | 3 / 76682 | 39 | |
pancreatic tumor | 3 / 104616 | 28 | |
primitive neuroectodermal tumor of the CNS | 12 / 125680 | 95 | |
prostate cancer | 24 / 102680 | 233 | |
retinoblastoma | 14 / 46356 | 302 | |
skin tumor | 7 / 124949 | 56 | |
soft tissue/muscle tissue tumor | 8 / 125191 | 63 | |
uterine tumor | 9 / 90257 | 99 |
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
adipose tissue | 0 / 13106 | 0 | |
adrenal gland | 1 / 33197 | 30 | |
ascites | 11 / 40015 | 274 | |
bladder | 24 / 29757 | 806 | |
blood | 13 / 123478 | 105 | |
bone | 10 / 71655 | 139 | |
bone marrow | 42 / 48801 | 860 | |
brain | 86 / 1100989 | 78 | |
cervix | 10 / 48171 | 207 | |
connective tissue | 4 / 149255 | 26 | |
ear | 0 / 16212 | 0 | |
embryonic tissue | 10 / 215722 | 46 | |
esophagus | 0 / 20209 | 0 | |
eye | 14 / 211054 | 66 | |
heart | 10 / 89626 | 111 | |
intestine | 10 / 234472 | 42 | |
kidney | 14 / 211777 | 66 | |
larynx | 4 / 24145 | 165 | |
liver | 25 / 207743 | 120 | |
lung | 14 / 336974 | 41 | |
lymph | 3 / 44270 | 67 | |
lymph node | 4 / 91610 | 43 | |
mammary gland | 3 / 153271 | 19 | |
mouth | 4 / 67052 | 59 | |
muscle | 4 / 107715 | 37 | |
nerve | 0 / 15768 | 0 | |
ovary | 3 / 102051 | 29 | |
pancreas | 7 / 214812 | 32 | |
parathyroid | 1 / 20539 | 48 | |
pharynx | 1 / 41328 | 24 | |
pituitary gland | 0 / 16585 | 0 | |
placenta | 17 / 280825 | 60 | |
prostate | 24 / 189345 | 126 | |
salivary gland | 14 / 20155 | 694 | |
skin | 8 / 210574 | 37 | |
spleen | 1 / 53952 | 18 | |
stomach | 4 / 96619 | 41 | |
testis | 108 / 330442 | 326 | |
thymus | 4 / 81131 | 49 | |
thyroid | 0 / 47473 | 0 | |
tonsil | 1 / 16999 | 58 | |
trachea | 0 / 52413 | 0 | |
umbilical cord | 0 / 13680 | 0 | |
uterus | 15 / 232878 | 64 | |
vascular | 0 / 51780 | 0 |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 211713_x_at
Cell line | Expression level | Expression bar |
---|---|---|
721_B_lymphoblasts | 102.5 | |
Adipocyte | 27.7 | |
AdrenalCortex | 70.4 | |
Adrenalgland | 29.4 | |
Amygdala | 26.85 | |
Appendix | 47.95 | |
AtrioventricularNode | 47.9 | |
BDCA4+_DentriticCells | 25.25 | |
Bonemarrow | 38.85 | |
BronchialEpithelialCells | 24.65 | |
CD105+_Endothelial | 88 | |
CD14+_Monocytes | 32.05 | |
CD19+_BCells(neg._sel.) | 30.35 | |
CD33+_Myeloid | 39.05 | |
CD34+ | 104.3 | |
CD4+_Tcells | 37.7 | |
CD56+_NKCells | 38.85 | |
CD71+_EarlyErythroid | 29.25 | |
CD8+_Tcells | 33.55 | |
CardiacMyocytes | 47.2 | |
Caudatenucleus | 27.3 | |
Cerebellum | 26.05 | |
CerebellumPeduncles | 44.9 | |
CiliaryGanglion | 36.65 | |
CingulateCortex | 40.3 | |
Colorectaladenocarcinoma | 32.8 | |
DorsalRootGanglion | 42.05 | |
FetalThyroid | 32.25 | |
Fetalbrain | 32 | |
Fetalliver | 28.6 | |
Fetallung | 24.7 | |
GlobusPallidus | 26.25 | |
Heart | 45.2 | |
Hypothalamus | 30.85 | |
Kidney | 26.15 | |
Leukemia_chronicMyelogenousK-562 | 29.45 | |
Leukemia_promyelocytic-HL-60 | 26.35 | |
Leukemialymphoblastic(MOLT-4) | 33.2 | |
Liver | 42.7 | |
Lung | 30.05 | |
Lymphnode | 27.95 | |
Lymphoma_burkitts(Daudi) | 42.3 | |
Lymphoma_burkitts(Raji) | 46 | |
MedullaOblongata | 30.4 | |
OccipitalLobe | 29.65 | |
OlfactoryBulb | 29.1 | |
Ovary | 23.1 | |
Pancreas | 28.8 | |
PancreaticIslet | 32.3 | |
ParietalLobe | 40.55 | |
Pituitary | 38.55 | |
Placenta | 25.05 | |
Pons | 56.45 | |
PrefrontalCortex | 41.35 | |
Prostate | 43.55 | |
Salivarygland | 26.8 | |
SkeletalMuscle | 51 | |
Skin | 48.4 | |
SmoothMuscle | 32.1 | |
Spinalcord | 30.35 | |
SubthalamicNucleus | 50.3 | |
SuperiorCervicalGanglion | 84.45 | |
TemporalLobe | 29.75 | |
Testis | 25.7 | |
TestisGermCell | 29.6 | |
TestisIntersitial | 29.85 | |
TestisLeydigCell | 34.7 | |
TestisSeminiferousTubule | 28.7 | |
Thalamus | 32.1 | |
Thymus | 33.8 | |
Thyroid | 35.05 | |
Tongue | 57.5 | |
Tonsil | 42.65 | |
Trachea | 23.5 | |
TrigeminalGanglion | 66.7 | |
Uterus | 26.85 | |
UterusCorpus | 43.3 | |
WholeBlood | 25.45 | |
Wholebrain | 13.8 | |
colon | 42.55 | |
pineal_day | 42.9 | |
pineal_night | 46.58 | |
retina | 39.2 | |
small_intestine | 34.4 |
Human Whole Brain Microarrayview in Allen Brain Atlas
- Probe name: A_23_P117852
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue | Expression(mean ± stddev) | Expression Bar |
---|---|---|
Amygdala | 3.13 ± 1.03 | |
Basal Forebrain | 2.4 ± 0.25 | |
Basal Part of Pons | 2.9 ± 0.63 | |
Cerebellar Cortex | 2.33 ± 0.52 | |
Cerebellar Nuclei | 3.23 ± 0.61 | |
Claustrum | 3.13 ± 0.77 | |
Epithalamus | 4.47 ± 0.99 | |
Frontal Lobe | 3.04 ± 0.8 | |
Globus Pallidus | 4.35 ± 0.31 | |
Hypothalamus | 3.21 ± 0.49 | |
Insula | 2.69 ± 0.72 | |
Limbic Lobe | 2.71 ± 0.73 | |
Mesencephalon | 3.18 ± 0.82 | |
Myelencephalon | 2.91 ± 0.74 | |
Occipital Lobe | 2.56 ± 0.75 | |
Parietal Lobe | 2.97 ± 0.83 | |
Pontine Tegmentum | 2.98 ± 0.81 | |
Striatum | 2.87 ± 0.71 | |
Subthalamus | 3.03 ± 0.69 | |
Temporal Lobe | 2.81 ± 0.82 | |
Thalamus | 2.8 ± 0.68 | |
White Matter | 5.29 ± 0.28 |
Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
---|---|---|---|---|
2810417H13Rik | CB | Cerebellum | 13.56 | |
15.88 | ||||
2810417H13Rik | CTX | Cerebral cortex | 24.67 | |
16.74 | ||||
2810417H13Rik | HIP | Hippocampal region | 9.16 | |
8.92 | ||||
2810417H13Rik | HPF | Hippocampal formation | 17.09 | |
14.45 | ||||
2810417H13Rik | HY | Hypothalamus | 1.02 | |
0.87 | ||||
2810417H13Rik | LSX | Lateral septal complex | 0.82 | |
0.74 | ||||
2810417H13Rik | MB | Midbrain | 3.26 | |
3.62 | ||||
2810417H13Rik | MY | Medulla | 8.02 | |
6.77 | ||||
2810417H13Rik | OLF | Olfactory bulb | 21.17 | |
15.07 | ||||
2810417H13Rik | P | Pons | 5.03 | |
4.12 | ||||
2810417H13Rik | PAL | Pallidum | 6.81 | |
4.82 | ||||
2810417H13Rik | RHP | Retrohippocampal region | 34.48 | |
25.16 | ||||
2810417H13Rik | sAMY | Striatum-like amygdalar nuclei | 12.54 | |
7.43 | ||||
2810417H13Rik | STR | Striatum | 12.42 | |
8.51 | ||||
2810417H13Rik | STRd | Striatum dorsal region | 11.1 | |
7.51 | ||||
2810417H13Rik | STRv | Striatum ventral region | 20.55 | |
13.96 | ||||
2810417H13Rik | TH | Thalamus | 1.83 | |
2.08 |
Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
---|---|---|---|---|---|
PAF_HUMAN_23 | 18 | 23 | 40 | KVLGSSTSATNSTSVSSR | PRIDE |
PAp00008802 | 14 | 47 | 60 | YAGGNPVCVRPTPK | Peptide Atlas |