AutismKB 2.0

Annotation Detail for TATDN2


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Basic Information Top
Gene Symbol:TATDN2 ( KIAA0218,MGC126819,MGC126825 )
Gene Full Name: TatD DNase domain containing 2
Band: 3p25.3
Quick LinksEntrez ID:9797; OMIM: NA; Uniprot ID:TATD2_HUMAN; ENSEMBL ID: ENSG00000157014; HGNC ID: 28988
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body2 / 7076128
blastocyst1 / 6231916
fetus24 / 56401242
neonate1 / 3109732
infant0 / 236200 
juvenile1 / 5555617
adult85 / 193912143
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma0 / 174750 
breast (mammary gland) tumor7 / 9417874
cervical tumor1 / 3436629
chondrosarcoma5 / 8282360
colorectal tumor6 / 11424652
esophageal tumor0 / 172900 
gastrointestinal tumor3 / 11936925
germ cell tumor18 / 26384568
glioma14 / 106883130
head and neck tumor1 / 1363027
kidney tumor2 / 6895929
leukemia8 / 9584283
liver tumor8 / 9635983
lung tumor5 / 10312748
lymphoma14 / 71755195
non-neoplasia6 / 9725061
normal119 / 336030735
ovarian tumor2 / 7668226
pancreatic tumor4 / 10461638
primitive neuroectodermal tumor of the CNS2 / 12568015
prostate cancer6 / 10268058
retinoblastoma2 / 4635643
skin tumor6 / 12494948
soft tissue/muscle tissue tumor6 / 12519147
uterine tumor3 / 9025733
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland1 / 3319730
ascites0 / 400150 
bladder1 / 2975733
blood11 / 12347889
bone0 / 716550 
bone marrow0 / 488010 
brain43 / 110098939
cervix2 / 4817141
connective tissue6 / 14925540
ear0 / 162120 
embryonic tissue6 / 21572227
esophagus0 / 202090 
eye10 / 21105447
heart6 / 8962666
intestine13 / 23447255
kidney14 / 21177766
larynx0 / 241450 
liver9 / 20774343
lung19 / 33697456
lymph5 / 44270112
lymph node11 / 91610120
mammary gland12 / 15327178
mouth1 / 6705214
muscle4 / 10771537
nerve1 / 1576863
ovary3 / 10205129
pancreas6 / 21481227
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate12 / 18934563
salivary gland0 / 201550 
skin13 / 21057461
spleen1 / 5395218
stomach1 / 9661910
testis5 / 33044215
thymus1 / 8113112
thyroid0 / 474730 
tonsil1 / 1699958
trachea0 / 524130 
umbilical cord3 / 13680219
uterus8 / 23287834
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 203648_at
Cell line Expression level Expression bar
721_B_lymphoblasts132.3
Adipocyte79.5
AdrenalCortex82.65
Adrenalgland91.6
Amygdala84.35
Appendix79.05
AtrioventricularNode50.9
BDCA4+_DentriticCells303.8
Bonemarrow99.7
BronchialEpithelialCells77.6
CD105+_Endothelial82.3
CD14+_Monocytes80.95
CD19+_BCells(neg._sel.)313.3
CD33+_Myeloid169.2
CD34+209
CD4+_Tcells352.5
CD56+_NKCells468.5
CD71+_EarlyErythroid63.9
CD8+_Tcells299.15
CardiacMyocytes111.45
Caudatenucleus77.35
Cerebellum73.25
CerebellumPeduncles113.3
CiliaryGanglion46.65
CingulateCortex85.95
Colorectaladenocarcinoma79
DorsalRootGanglion50.85
FetalThyroid95.45
Fetalbrain148.05
Fetalliver70.75
Fetallung61.7
GlobusPallidus43.95
Heart101.65
Hypothalamus96.95
Kidney63.55
Leukemia_chronicMyelogenousK-56272.9
Leukemia_promyelocytic-HL-6067.7
Leukemialymphoblastic(MOLT-4)151.15
Liver97.7
Lung90.9
Lymphnode115.95
Lymphoma_burkitts(Daudi)124.85
Lymphoma_burkitts(Raji)121.95
MedullaOblongata79.2
OccipitalLobe83.05
OlfactoryBulb63.45
Ovary53.45
Pancreas69.6
PancreaticIslet170.65
ParietalLobe90.35
Pituitary110.85
Placenta80.9
Pons87.85
PrefrontalCortex129.3
Prostate107.6
Salivarygland62.45
SkeletalMuscle101.2
Skin56.8
SmoothMuscle95.95
Spinalcord87.45
SubthalamicNucleus51.65
SuperiorCervicalGanglion99.15
TemporalLobe87.7
Testis94.35
TestisGermCell76.9
TestisIntersitial58.2
TestisLeydigCell76.75
TestisSeminiferousTubule74.05
Thalamus75.1
Thymus120.3
Thyroid133.35
Tongue78.6
Tonsil97.05
Trachea91
TrigeminalGanglion78.65
Uterus67.65
UterusCorpus65.45
WholeBlood129
Wholebrain73.4
colon82.05
pineal_day74.02
pineal_night74.94
retina119.725
small_intestine82.55
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P592318
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala6.72 ± 0.73
Basal Forebrain6.85 ± 0.41
Basal Part of Pons6.63 ± 0.58
Cerebellar Cortex6.34 ± 0.91
Cerebellar Nuclei6.64 ± 0.4
Claustrum7.12 ± 0.77
Epithalamus5.98 ± 0.41
Frontal Lobe6.5 ± 0.64
Globus Pallidus7 ± 0.45
Hypothalamus6.56 ± 0.54
Insula6.59 ± 0.97
Limbic Lobe6.65 ± 0.69
Mesencephalon6.69 ± 0.78
Myelencephalon6.6 ± 0.65
Occipital Lobe6.52 ± 0.76
Parietal Lobe6.39 ± 0.56
Pontine Tegmentum6.25 ± 0.58
Striatum6.59 ± 0.5
Subthalamus6.47 ± 0.26
Temporal Lobe6.39 ± 0.68
Thalamus6.54 ± 0.54
White Matter6.99 ± 0.6
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Tatdn2CBCerebellum100
100
Tatdn2CTXCerebral cortex100
100
Tatdn2HIPHippocampal region100
100
Tatdn2HPFHippocampal formation100
100
Tatdn2HYHypothalamus100
100
Tatdn2LSXLateral septal complex100
100
Tatdn2MBMidbrain100
100
Tatdn2MYMedulla100
100
Tatdn2OLFOlfactory bulb100
100
Tatdn2PPons100
100
Tatdn2PALPallidum100
100
Tatdn2RHPRetrohippocampal region100
100
Tatdn2sAMYStriatum-like amygdalar nuclei100
100
Tatdn2STRStriatum100
100
Tatdn2STRdStriatum dorsal region100
100
Tatdn2STRvStriatum ventral region100
100
Tatdn2THThalamus100
100
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
TATD2_HUMAN_59 16 59 74 EDDVACSRRLSWGSSR PRIDE

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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