AutismKB 2.0

Annotation Detail for ZNF623


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Basic Information Top
Gene Symbol:ZNF623 ( MGC103965,MGC104128 )
Gene Full Name: zinc finger protein 623
Band: 8q24.3
Quick LinksEntrez ID:9831; OMIM: NA; Uniprot ID:ZN623_HUMAN; ENSEMBL ID: ENSG00000183309; HGNC ID: 29084
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body3 / 7076142
blastocyst4 / 6231964
fetus5 / 5640128
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult24 / 193912112
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor2 / 9417821
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor3 / 11424626
esophageal tumor0 / 172900 
gastrointestinal tumor1 / 1193698
germ cell tumor2 / 2638457
glioma0 / 1068830 
head and neck tumor4 / 13630229
kidney tumor0 / 689590 
leukemia1 / 9584210
liver tumor2 / 9635920
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal44 / 336030713
ovarian tumor1 / 7668213
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS2 / 12568015
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland1 / 3319730
ascites0 / 400150 
bladder0 / 297570 
blood3 / 12347824
bone1 / 7165513
bone marrow0 / 488010 
brain16 / 110098914
cervix0 / 481710 
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue8 / 21572237
esophagus0 / 202090 
eye1 / 2110544
heart0 / 896260 
intestine6 / 23447225
kidney1 / 2117774
larynx2 / 2414582
liver3 / 20774314
lung0 / 3369740 
lymph0 / 442700 
lymph node1 / 9161010
mammary gland3 / 15327119
mouth1 / 6705214
muscle4 / 10771537
nerve0 / 157680 
ovary1 / 1020519
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta3 / 28082510
prostate0 / 1893450 
salivary gland1 / 2015549
skin0 / 2105740 
spleen0 / 539520 
stomach0 / 966190 
testis4 / 33044212
thymus2 / 8113124
thyroid1 / 4747321
tonsil0 / 169990 
trachea1 / 5241319
umbilical cord0 / 136800 
uterus3 / 23287812
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 206188_at
Cell line Expression level Expression bar
721_B_lymphoblasts10.3
Adipocyte10.85
AdrenalCortex17.9
Adrenalgland11.4
Amygdala15.15
Appendix18.9
AtrioventricularNode14.5
BDCA4+_DentriticCells10.15
Bonemarrow15.65
BronchialEpithelialCells10.8
CD105+_Endothelial11.3
CD14+_Monocytes13.1
CD19+_BCells(neg._sel.)12
CD33+_Myeloid13.75
CD34+20
CD4+_Tcells12.2
CD56+_NKCells13.6
CD71+_EarlyErythroid11.4
CD8+_Tcells10.15
CardiacMyocytes21.5
Caudatenucleus11.1
Cerebellum9.95
CerebellumPeduncles21.8
CiliaryGanglion15.7
CingulateCortex13
Colorectaladenocarcinoma11.35
DorsalRootGanglion14.25
FetalThyroid13.05
Fetalbrain15
Fetalliver10.65
Fetallung7.55
GlobusPallidus10.15
Heart26.25
Hypothalamus10.7
Kidney12.5
Leukemia_chronicMyelogenousK-56210
Leukemia_promyelocytic-HL-6010
Leukemialymphoblastic(MOLT-4)9.2
Liver21.2
Lung12.9
Lymphnode9.85
Lymphoma_burkitts(Daudi)15.8
Lymphoma_burkitts(Raji)20.15
MedullaOblongata11.6
OccipitalLobe10.7
OlfactoryBulb8.85
Ovary10.3
Pancreas10.35
PancreaticIslet13.05
ParietalLobe14.85
Pituitary14.2
Placenta11.45
Pons12.55
PrefrontalCortex15.65
Prostate13.15
Salivarygland10.5
SkeletalMuscle26.75
Skin15.85
SmoothMuscle13.1
Spinalcord11.85
SubthalamicNucleus11.85
SuperiorCervicalGanglion28.55
TemporalLobe11.95
Testis9.75
TestisGermCell8.25
TestisIntersitial10.8
TestisLeydigCell12.55
TestisSeminiferousTubule10.35
Thalamus12.7
Thymus9.1
Thyroid15.05
Tongue16.55
Tonsil11.95
Trachea9.8
TrigeminalGanglion26.6
Uterus10.25
UterusCorpus14.85
WholeBlood12.3
Wholebrain10.9
colon11.35
pineal_day14.32
pineal_night14.28
retina14.5
small_intestine15.3
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P258931
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.41 ± 0.76
Basal Forebrain2.73 ± 0.35
Basal Part of Pons2.84 ± 0.49
Cerebellar Cortex3.54 ± 0.43
Cerebellar Nuclei3.08 ± 0.59
Claustrum3.16 ± 0.53
Epithalamus2.86 ± 0.61
Frontal Lobe3.23 ± 0.62
Globus Pallidus2.38 ± 0.56
Hypothalamus3.22 ± 0.4
Insula3.4 ± 0.48
Limbic Lobe3.09 ± 0.6
Mesencephalon3.21 ± 0.72
Myelencephalon3.13 ± 0.56
Occipital Lobe2.91 ± 0.73
Parietal Lobe3.05 ± 0.58
Pontine Tegmentum3.17 ± 0.6
Striatum2.91 ± 0.62
Subthalamus3.13 ± 0.67
Temporal Lobe3.3 ± 0.51
Thalamus3.04 ± 0.61
White Matter2.32 ± 0.69
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Zfp623CBCerebellum6.93
6.77
Zfp623CTXCerebral cortex19.94
14.22
Zfp623HIPHippocampal region18.23
17.63
Zfp623HPFHippocampal formation21.57
18.86
Zfp623HYHypothalamus4.27
3.65
Zfp623LSXLateral septal complex3.61
3.07
Zfp623MBMidbrain2.5
2.57
Zfp623MYMedulla11.04
12.64
Zfp623OLFOlfactory bulb38.26
29.25
Zfp623PPons10.18
11.68
Zfp623PALPallidum3.83
3.23
Zfp623RHPRetrohippocampal region30.78
22.91
Zfp623sAMYStriatum-like amygdalar nuclei9.05
7.14
Zfp623STRStriatum6.18
4.36
Zfp623STRdStriatum dorsal region4.33
2.98
Zfp623STRvStriatum ventral region12.01
7.6
Zfp623THThalamus8.71
10.13
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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