Annotation Detail for ZNF518A
Basic Information Top
| Gene Symbol: | ZNF518A ( DKFZp781O2147,MGC125707,MGC125710,ZNF518 ) |
|---|---|
| Gene Full Name: | zinc finger protein 518A |
| Band: | 10q24.1 |
| Quick Links | Entrez ID:9849; OMIM: NA; Uniprot ID:Z518A_HUMAN; ENSEMBL ID: ENSG00000177853; HGNC ID: 29009 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.600823
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 3 / 70761 | 42 |  |
| blastocyst | 3 / 62319 | 48 | |
| fetus | 12 / 564012 | 21 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 2 / 55556 | 35 | |
| adult | 49 / 1939121 | 25 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 1 / 17475 | 57 |  |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 2 / 82823 | 24 | |
| colorectal tumor | 4 / 114246 | 35 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 7 / 263845 | 26 | |
| glioma | 1 / 106883 | 9 |  |
| head and neck tumor | 8 / 136302 | 58 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 3 / 95842 | 31 | |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 2 / 71755 | 27 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 104 / 3360307 | 30 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 2 / 33197 | 60 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 1 / 29757 | 33 | |
| blood | 4 / 123478 | 32 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 28 / 1100989 | 25 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 11 / 215722 | 50 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 1 / 211054 | 4 | |
| heart | 0 / 89626 | 0 | |
| intestine | 6 / 234472 | 25 | |
| kidney | 4 / 211777 | 18 | |
| larynx | 0 / 24145 | 0 | |
| liver | 3 / 207743 | 14 | |
| lung | 5 / 336974 | 14 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 5 / 91610 | 54 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 7 / 67052 | 104 | |
| muscle | 7 / 107715 | 64 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 4 / 214812 | 18 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 16 / 280825 | 56 | |
| prostate | 3 / 189345 | 15 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 11 / 330442 | 33 | |
| thymus | 5 / 81131 | 61 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 6 / 52413 | 114 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 9 / 232878 | 38 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: A_23_P35576
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.62 ± 0.27 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7.82 ± 0.13 | |
| Basal Part of Pons | 7.73 ± 0.19 | |
| Cerebellar Cortex | 7.88 ± 0.16 | |
| Cerebellar Nuclei | 7.65 ± 0.18 | |
| Claustrum | 7.62 ± 0.38 | |
| Epithalamus | 7.8 ± 0.3 | |
| Frontal Lobe | 7.44 ± 0.29 | |
| Globus Pallidus | 8.02 ± 0.36 | |
| Hypothalamus | 7.78 ± 0.29 | |
| Insula | 7.56 ± 0.22 | |
| Limbic Lobe | 7.52 ± 0.39 | |
| Mesencephalon | 7.64 ± 0.37 | |
| Myelencephalon | 7.61 ± 0.29 | |
| Occipital Lobe | 7.94 ± 0.34 | |
| Parietal Lobe | 7.58 ± 0.29 | |
| Pontine Tegmentum | 7.62 ± 0.35 | |
| Striatum | 7.76 ± 0.37 | |
| Subthalamus | 7.54 ± 0.35 | |
| Temporal Lobe | 7.58 ± 0.25 | |
| Thalamus | 7.69 ± 0.24 | |
| White Matter | 8.78 ± 0.08 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Zfp518 | CB | Cerebellum | 1.32 | |
| 2.11 | | |||
| Zfp518 | CTX | Cerebral cortex | 0.47 | |
| 0.41 | | |||
| Zfp518 | HIP | Hippocampal region | 0.47 | |
| 0.36 | | |||
| Zfp518 | HPF | Hippocampal formation | 0.4 | |
| 0.34 | | |||
| Zfp518 | HY | Hypothalamus | 0.3 | |
| 0.26 | | |||
| Zfp518 | LSX | Lateral septal complex | 0.09 | |
| 0.05 | | |||
| Zfp518 | MB | Midbrain | 0.12 | |
| 0.21 | | |||
| Zfp518 | MY | Medulla | 0.73 | |
| 1.07 | | |||
| Zfp518 | OLF | Olfactory bulb | 1.12 | |
| 0.92 | | |||
| Zfp518 | P | Pons | 0.34 | |
| 0.35 | | |||
| Zfp518 | PAL | Pallidum | 0.17 | |
| 0.14 | | |||
| Zfp518 | RHP | Retrohippocampal region | 0.29 | |
| 0.32 | | |||
| Zfp518 | sAMY | Striatum-like amygdalar nuclei | 0 | |
| 0 | | |||
| Zfp518 | STR | Striatum | 0.06 | |
| 0.12 | | |||
| Zfp518 | STRd | Striatum dorsal region | 0.06 | |
| 0.16 | | |||
| Zfp518 | STRv | Striatum ventral region | 0.1 | |
| 0.08 | | |||
| Zfp518 | TH | Thalamus | 0.13 | |
| 0.13 | |