AutismKB 2.0

Annotation Detail for POM121


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Basic Information Top
Gene Symbol:POM121 ( DKFZp586G1822,DKFZp586P2220,FLJ41820,KIAA0618,MGC3792,POM121A )
Gene Full Name: POM121 membrane glycoprotein
Band: 7q11.23
Quick LinksEntrez ID:9883; OMIM: NA; Uniprot ID:P121A_HUMAN; ENSEMBL ID: ENSG00000196313; HGNC ID: 19702
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body5 / 7076170
blastocyst4 / 6231964
fetus42 / 56401274
neonate0 / 310970 
infant0 / 236200 
juvenile5 / 5555689
adult171 / 193912188
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor4 / 12794312
bladder carcinoma0 / 174750 
breast (mammary gland) tumor5 / 9417853
cervical tumor3 / 3436687
chondrosarcoma6 / 8282372
colorectal tumor19 / 114246166
esophageal tumor0 / 172900 
gastrointestinal tumor9 / 11936975
germ cell tumor27 / 263845102
glioma11 / 106883102
head and neck tumor10 / 13630273
kidney tumor4 / 6895958
leukemia15 / 95842156
liver tumor4 / 9635941
lung tumor6 / 10312758
lymphoma10 / 71755139
non-neoplasia3 / 9725030
normal207 / 336030761
ovarian tumor4 / 7668252
pancreatic tumor9 / 10461686
primitive neuroectodermal tumor of the CNS14 / 125680111
prostate cancer13 / 102680126
retinoblastoma4 / 4635686
skin tumor32 / 124949256
soft tissue/muscle tissue tumor11 / 12519187
uterine tumor6 / 9025766
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland4 / 33197120
ascites6 / 40015149
bladder1 / 2975733
blood11 / 12347889
bone4 / 7165555
bone marrow1 / 4880120
brain80 / 110098972
cervix4 / 4817183
connective tissue5 / 14925533
ear0 / 162120 
embryonic tissue14 / 21572264
esophagus0 / 202090 
eye15 / 21105471
heart6 / 8962666
intestine32 / 234472136
kidney13 / 21177761
larynx1 / 2414541
liver7 / 20774333
lung22 / 33697465
lymph7 / 44270158
lymph node26 / 91610283
mammary gland9 / 15327158
mouth7 / 67052104
muscle4 / 10771537
nerve0 / 157680 
ovary11 / 102051107
pancreas19 / 21481288
parathyroid1 / 2053948
pharynx2 / 4132848
pituitary gland0 / 165850 
placenta22 / 28082578
prostate20 / 189345105
salivary gland0 / 201550 
skin41 / 210574194
spleen1 / 5395218
stomach2 / 9661920
testis24 / 33044272
thymus6 / 8113173
thyroid2 / 4747342
tonsil0 / 169990 
trachea3 / 5241357
umbilical cord0 / 136800 
uterus17 / 23287872
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 213360_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts1169.9
Adipocyte424.45
AdrenalCortex468.6
Adrenalgland465.45
Amygdala602.15
Appendix184.15
AtrioventricularNode151.9
BDCA4+_DentriticCells506.25
Bonemarrow687.8
BronchialEpithelialCells490.9
CD105+_Endothelial617.15
CD14+_Monocytes533.75
CD19+_BCells(neg._sel.)654.4
CD33+_Myeloid763.9
CD34+879.8
CD4+_Tcells654.8
CD56+_NKCells855.3
CD71+_EarlyErythroid369.2
CD8+_Tcells645.6
CardiacMyocytes253.75
Caudatenucleus577.55
Cerebellum610.4
CerebellumPeduncles830.8
CiliaryGanglion136.2
CingulateCortex761.25
Colorectaladenocarcinoma892.65
DorsalRootGanglion116.15
FetalThyroid933.05
Fetalbrain828.3
Fetalliver370.7
Fetallung477.15
GlobusPallidus339.05
Heart379.8
Hypothalamus731.85
Kidney364.95
Leukemia_chronicMyelogenousK-5621006.1
Leukemia_promyelocytic-HL-60668.3
Leukemialymphoblastic(MOLT-4)1285.45
Liver415.2
Lung506.95
Lymphnode801.3
Lymphoma_burkitts(Daudi)1300.4
Lymphoma_burkitts(Raji)997.45
MedullaOblongata550.9
OccipitalLobe576.1
OlfactoryBulb383.6
Ovary255.45
Pancreas317.65
PancreaticIslet636.7
ParietalLobe544.3
Pituitary621.6
Placenta818.75
Pons549.35
PrefrontalCortex763.9
Prostate468.1
Salivarygland295.15
SkeletalMuscle285.45
Skin167.6
SmoothMuscle441.9
Spinalcord554.6
SubthalamicNucleus468.3
SuperiorCervicalGanglion216.7
TemporalLobe442
Testis781.05
TestisGermCell674.85
TestisIntersitial422.85
TestisLeydigCell419.4
TestisSeminiferousTubule740.45
Thalamus603.8
Thymus724.45
Thyroid547
Tongue274.85
Tonsil824.3
Trachea388.4
TrigeminalGanglion351.35
Uterus375.1
UterusCorpus347.4
WholeBlood528.65
Wholebrain454.8
colon222.2
pineal_day1526.58
pineal_night1377.86
retina696.375
small_intestine291.95
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_3192_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.02 ± 1.06
Basal Forebrain1.57 ± 0.21
Basal Part of Pons1.35 ± 0.37
Cerebellar Cortex1.65 ± 0.75
Cerebellar Nuclei1.97 ± 0.82
Claustrum2.47 ± 0.83
Epithalamus1.44 ± 0.84
Frontal Lobe1.51 ± 0.67
Globus Pallidus1.98 ± 0.34
Hypothalamus1.7 ± 0.71
Insula1.86 ± 0.78
Limbic Lobe1.69 ± 0.67
Mesencephalon1.79 ± 0.72
Myelencephalon1.74 ± 0.68
Occipital Lobe1.79 ± 0.68
Parietal Lobe1.66 ± 0.76
Pontine Tegmentum1.67 ± 0.65
Striatum1.75 ± 0.62
Subthalamus1.75 ± 0.72
Temporal Lobe1.64 ± 0.68
Thalamus1.64 ± 0.59
White Matter2.12 ± 0.36
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Pom121CBCerebellum100
100
Pom121CTXCerebral cortex100
94.58
Pom121HIPHippocampal region73.96
100
Pom121HPFHippocampal formation84.46
100
Pom121HYHypothalamus56.32
46.6
Pom121LSXLateral septal complex39.74
26.75
Pom121MBMidbrain57.77
52
Pom121MYMedulla53.43
55.57
Pom121OLFOlfactory bulb95.53
99.18
Pom121PPons52.41
54.59
Pom121PALPallidum52.22
46.56
Pom121RHPRetrohippocampal region100
95.36
Pom121sAMYStriatum-like amygdalar nuclei69.98
56.71
Pom121STRStriatum57.6
44.38
Pom121STRdStriatum dorsal region58.37
45.23
Pom121STRvStriatum ventral region48.97
36.59
Pom121THThalamus55.45
45.17
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00504857 24 413 436 APPTLQAETATKPQATSAPSPAPK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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