AutismKB 2.0

Annotation Detail for TECPR2


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Basic Information Top
Gene Symbol:TECPR2 ( KIAA0297,KIAA0329 )
Gene Full Name: tectonin beta-propeller repeat containing 2
Band: 14q32.33
Quick LinksEntrez ID:9895; OMIM: NA; Uniprot ID:TCPR2_HUMAN; ENSEMBL ID: ENSG00000196663; HGNC ID: 19957
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst0 / 623190 
fetus20 / 56401235
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult55 / 193912128
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor1 / 9417810
cervical tumor3 / 3436687
chondrosarcoma8 / 8282396
colorectal tumor1 / 1142468
esophageal tumor1 / 1729057
gastrointestinal tumor0 / 1193690 
germ cell tumor4 / 26384515
glioma3 / 10688328
head and neck tumor7 / 13630251
kidney tumor1 / 6895914
leukemia5 / 9584252
liver tumor0 / 963590 
lung tumor1 / 1031279
lymphoma0 / 717550 
non-neoplasia1 / 9725010
normal93 / 336030727
ovarian tumor0 / 766820 
pancreatic tumor1 / 1046169
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer1 / 1026809
retinoblastoma0 / 463560 
skin tumor1 / 1249498
soft tissue/muscle tissue tumor4 / 12519131
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood4 / 12347832
bone2 / 7165527
bone marrow2 / 4880140
brain34 / 110098930
cervix3 / 4817162
connective tissue3 / 14925520
ear0 / 162120 
embryonic tissue1 / 2157224
esophagus1 / 2020949
eye9 / 21105442
heart4 / 8962644
intestine10 / 23447242
kidney6 / 21177728
larynx2 / 2414582
liver1 / 2077434
lung12 / 33697435
lymph0 / 442700 
lymph node1 / 9161010
mammary gland2 / 15327113
mouth1 / 6705214
muscle5 / 10771546
nerve0 / 157680 
ovary0 / 1020510 
pancreas2 / 2148129
parathyroid2 / 2053997
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta6 / 28082521
prostate2 / 18934510
salivary gland4 / 20155198
skin2 / 2105749
spleen0 / 539520 
stomach0 / 966190 
testis17 / 33044251
thymus3 / 8113136
thyroid1 / 4747321
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus6 / 23287825
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 204308_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts6.35
Adipocyte5.7
AdrenalCortex6.2
Adrenalgland4.95
Amygdala18.9
Appendix6.05
AtrioventricularNode4.2
BDCA4+_DentriticCells6.2
Bonemarrow5.9
BronchialEpithelialCells5.7
CD105+_Endothelial6.05
CD14+_Monocytes6.7
CD19+_BCells(neg._sel.)5.65
CD33+_Myeloid9.7
CD34+7.45
CD4+_Tcells6.4
CD56+_NKCells8.1
CD71+_EarlyErythroid5.05
CD8+_Tcells5.85
CardiacMyocytes7.25
Caudatenucleus9.4
Cerebellum4.95
CerebellumPeduncles6.9
CiliaryGanglion3.65
CingulateCortex9.1
Colorectaladenocarcinoma6.25
DorsalRootGanglion4.6
FetalThyroid6
Fetalbrain5.95
Fetalliver5.25
Fetallung4.5
GlobusPallidus4.55
Heart7.65
Hypothalamus22.95
Kidney4.9
Leukemia_chronicMyelogenousK-5625.5
Leukemia_promyelocytic-HL-604.85
Leukemialymphoblastic(MOLT-4)4.65
Liver7.95
Lung14.5
Lymphnode4.7
Lymphoma_burkitts(Daudi)7.15
Lymphoma_burkitts(Raji)7.75
MedullaOblongata12.15
OccipitalLobe15.4
OlfactoryBulb4.85
Ovary3.95
Pancreas4.65
PancreaticIslet6.35
ParietalLobe11.45
Pituitary6.75
Placenta8.4
Pons6
PrefrontalCortex36.3
Prostate8.6
Salivarygland4.85
SkeletalMuscle7.05
Skin4.6
SmoothMuscle7.05
Spinalcord7.2
SubthalamicNucleus6.7
SuperiorCervicalGanglion6.8
TemporalLobe9.85
Testis18.85
TestisGermCell11.5
TestisIntersitial7.6
TestisLeydigCell6.05
TestisSeminiferousTubule5.35
Thalamus10.85
Thymus4.95
Thyroid7.7
Tongue5.9
Tonsil5.65
Trachea4.25
TrigeminalGanglion5.9
Uterus9.7
UterusCorpus6.2
WholeBlood40.55
Wholebrain24.25
colon5.95
pineal_day24.78
pineal_night13.56
retina17.9
small_intestine5.7
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P394216
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala9.3 ± 0.17
Basal Forebrain9.21 ± 0.13
Basal Part of Pons8.88 ± 0.2
Cerebellar Cortex8.98 ± 0.2
Cerebellar Nuclei9.05 ± 0.26
Claustrum9.46 ± 0.33
Epithalamus9.04 ± 0.33
Frontal Lobe9.36 ± 0.26
Globus Pallidus9.41 ± 0.25
Hypothalamus8.84 ± 0.29
Insula9.53 ± 0.14
Limbic Lobe9.48 ± 0.26
Mesencephalon9.3 ± 0.31
Myelencephalon9.32 ± 0.33
Occipital Lobe9.23 ± 0.22
Parietal Lobe9.24 ± 0.3
Pontine Tegmentum9.36 ± 0.24
Striatum9.24 ± 0.37
Subthalamus8.98 ± 0.31
Temporal Lobe9.43 ± 0.29
Thalamus9.44 ± 0.25
White Matter9.93 ± 0.15
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
4930573I19RikCBCerebellum10.83
11.24
4930573I19RikCTXCerebral cortex33.37
26.07
4930573I19RikHIPHippocampal region23.29
25.83
4930573I19RikHPFHippocampal formation25.05
24.43
4930573I19RikHYHypothalamus2.63
2.2
4930573I19RikLSXLateral septal complex1.82
1.32
4930573I19RikMBMidbrain5.2
5.08
4930573I19RikMYMedulla8.63
9.65
4930573I19RikOLFOlfactory bulb29.55
25.86
4930573I19RikPPons5.64
6.15
4930573I19RikPALPallidum2.75
2.38
4930573I19RikRHPRetrohippocampal region28.47
22.83
4930573I19RiksAMYStriatum-like amygdalar nuclei3.27
2.43
4930573I19RikSTRStriatum5.5
4.06
4930573I19RikSTRdStriatum dorsal region5.1
3.87
4930573I19RikSTRvStriatum ventral region8.98
6.04
4930573I19RikTHThalamus7.14
5.86
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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