AutismKB 2.0

Annotation Detail for THRAP3


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Basic Information Top
Gene Symbol:THRAP3 ( FLJ22082,MGC133082,MGC133083,TRAP150 )
Gene Full Name: thyroid hormone receptor associated protein 3
Band: 1p34.3
Quick LinksEntrez ID:9967; OMIM: 603809; Uniprot ID:TR150_HUMAN; ENSEMBL ID: ENSG00000054118; HGNC ID: 22964
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body11 / 70761155
blastocyst2 / 6231932
fetus32 / 56401256
neonate0 / 310970 
infant0 / 236200 
juvenile3 / 5555653
adult151 / 193912177
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma3 / 17475171
breast (mammary gland) tumor5 / 9417853
cervical tumor3 / 3436687
chondrosarcoma8 / 8282396
colorectal tumor15 / 114246131
esophageal tumor1 / 1729057
gastrointestinal tumor4 / 11936933
germ cell tumor27 / 263845102
glioma4 / 10688337
head and neck tumor8 / 13630258
kidney tumor3 / 6895943
leukemia11 / 95842114
liver tumor6 / 9635962
lung tumor2 / 10312719
lymphoma7 / 7175597
non-neoplasia4 / 9725041
normal209 / 336030762
ovarian tumor3 / 7668239
pancreatic tumor3 / 10461628
primitive neuroectodermal tumor of the CNS2 / 12568015
prostate cancer12 / 102680116
retinoblastoma0 / 463560 
skin tumor6 / 12494948
soft tissue/muscle tissue tumor13 / 125191103
uterine tumor8 / 9025788
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland1 / 3319730
ascites0 / 400150 
bladder3 / 29757100
blood10 / 12347880
bone9 / 71655125
bone marrow8 / 48801163
brain27 / 110098924
cervix3 / 4817162
connective tissue6 / 14925540
ear0 / 162120 
embryonic tissue16 / 21572274
esophagus1 / 2020949
eye9 / 21105442
heart5 / 8962655
intestine20 / 23447285
kidney12 / 21177756
larynx5 / 24145207
liver16 / 20774377
lung20 / 33697459
lymph5 / 44270112
lymph node4 / 9161043
mammary gland6 / 15327139
mouth2 / 6705229
muscle5 / 10771546
nerve1 / 1576863
ovary4 / 10205139
pancreas16 / 21481274
parathyroid0 / 205390 
pharynx22 / 41328532
pituitary gland0 / 165850 
placenta26 / 28082592
prostate19 / 189345100
salivary gland0 / 201550 
skin15 / 21057471
spleen0 / 539520 
stomach5 / 9661951
testis11 / 33044233
thymus0 / 811310 
thyroid3 / 4747363
tonsil0 / 169990 
trachea1 / 5241319
umbilical cord0 / 136800 
uterus22 / 23287894
vascular4 / 5178077
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 217847_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts8.2
Adipocyte6.1
AdrenalCortex6.8
Adrenalgland5.35
Amygdala6.1
Appendix7.35
AtrioventricularNode5.5
BDCA4+_DentriticCells7.25
Bonemarrow6.95
BronchialEpithelialCells6
CD105+_Endothelial6
CD14+_Monocytes6.45
CD19+_BCells(neg._sel.)6.35
CD33+_Myeloid7.65
CD34+8.8
CD4+_Tcells6.6
CD56+_NKCells7
CD71+_EarlyErythroid5.8
CD8+_Tcells5.8
CardiacMyocytes8.35
Caudatenucleus5.5
Cerebellum5.1
CerebellumPeduncles7.2
CiliaryGanglion4.7
CingulateCortex6.45
Colorectaladenocarcinoma6.15
DorsalRootGanglion5.4
FetalThyroid5.95
Fetalbrain6
Fetalliver5.4
Fetallung4.7
GlobusPallidus4.95
Heart9
Hypothalamus6.35
Kidney5.3
Leukemia_chronicMyelogenousK-5626
Leukemia_promyelocytic-HL-605.4
Leukemialymphoblastic(MOLT-4)4.9
Liver8.6
Lung6.65
Lymphnode5.1
Lymphoma_burkitts(Daudi)8.4
Lymphoma_burkitts(Raji)8.9
MedullaOblongata5.5
OccipitalLobe5.4
OlfactoryBulb4.85
Ovary4.05
Pancreas5
PancreaticIslet6.5
ParietalLobe7.05
Pituitary8.45
Placenta6.05
Pons6.05
PrefrontalCortex7.75
Prostate6.95
Salivarygland5.35
SkeletalMuscle8.65
Skin4.95
SmoothMuscle6.8
Spinalcord6.5
SubthalamicNucleus5.7
SuperiorCervicalGanglion7.65
TemporalLobe5.75
Testis5.2
TestisGermCell5
TestisIntersitial5.2
TestisLeydigCell6.15
TestisSeminiferousTubule5.25
Thalamus6.3
Thymus4.6
Thyroid7.3
Tongue6.3
Tonsil6.05
Trachea5.15
TrigeminalGanglion6.6
Uterus4.95
UterusCorpus5.9
WholeBlood6.75
Wholebrain4.7
colon6.1
pineal_day7.62
pineal_night7.36
retina7.575
small_intestine5.9
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P926367
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala9.58 ± 0.2
Basal Forebrain9.84 ± 0.1
Basal Part of Pons9.94 ± 0.18
Cerebellar Cortex10.04 ± 0.14
Cerebellar Nuclei9.88 ± 0.24
Claustrum9.86 ± 0.22
Epithalamus10.08 ± 0.23
Frontal Lobe9.87 ± 0.22
Globus Pallidus9.8 ± 0.14
Hypothalamus9.95 ± 0.24
Insula9.92 ± 0.26
Limbic Lobe9.76 ± 0.27
Mesencephalon9.83 ± 0.26
Myelencephalon9.82 ± 0.25
Occipital Lobe9.76 ± 0.26
Parietal Lobe9.86 ± 0.21
Pontine Tegmentum9.79 ± 0.23
Striatum9.62 ± 0.21
Subthalamus9.96 ± 0.26
Temporal Lobe9.84 ± 0.2
Thalamus9.81 ± 0.24
White Matter10 ± 0.16
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Thrap3CBCerebellum100
100
Thrap3CTXCerebral cortex100
100
Thrap3HIPHippocampal region100
100
Thrap3HPFHippocampal formation100
100
Thrap3HYHypothalamus100
100
Thrap3LSXLateral septal complex100
100
Thrap3MBMidbrain100
100
Thrap3MYMedulla100
100
Thrap3OLFOlfactory bulb100
100
Thrap3PPons100
100
Thrap3PALPallidum100
100
Thrap3RHPRetrohippocampal region100
100
Thrap3sAMYStriatum-like amygdalar nuclei100
100
Thrap3STRStriatum100
100
Thrap3STRdStriatum dorsal region100
100
Thrap3STRvStriatum ventral region100
100
Thrap3THThalamus100
100
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00007359 18 622 639 SPSELFAQHIVTIVHHVK Peptide Atlas
TR150_HUMAN_2 11 2 12 SKTNKSKSGSR PRIDE
TR150_HUMAN_609 13 609 621 SIFQHIQSAQSQR PRIDE
TR150_HUMAN_640 14 640 653 EHHFGSSGMTLHER PRIDE
TR150_HUMAN_678 10 678 687 RIDISPSTFR PRIDE
TR150_HUMAN_679 9 679 687 IDISPSTFR PRIDE
TR150_HUMAN_688 10 688 697 KHGLAHDEMK PRIDE
TR150_HUMAN_866 11 866 876 EEEWDPEYTPK PRIDE

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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