AutismKB 2.0

Annotation Detail for RCE1


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:RCE1 ( FACE2,RCE1A,RCE1B )
Gene Full Name: RCE1 homolog, prenyl protein peptidase (S. cerevisiae)
Band: 11q13.2
Quick LinksEntrez ID:9986; OMIM: 605385; Uniprot ID:FACE2_HUMAN; ENSEMBL ID: ENSG00000173653; HGNC ID: 13721
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst1 / 6231916
fetus8 / 56401214
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult15 / 19391217
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor2 / 9417821
cervical tumor0 / 343660 
chondrosarcoma2 / 8282324
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor1 / 1193698
germ cell tumor8 / 26384530
glioma2 / 10688318
head and neck tumor1 / 1363027
kidney tumor0 / 689590 
leukemia3 / 9584231
liver tumor0 / 963590 
lung tumor3 / 10312729
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal20 / 33603075
ovarian tumor4 / 7668252
pancreatic tumor3 / 10461628
primitive neuroectodermal tumor of the CNS1 / 1256807
prostate cancer2 / 10268019
retinoblastoma0 / 463560 
skin tumor4 / 12494932
soft tissue/muscle tissue tumor1 / 1251917
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites1 / 4001524
bladder0 / 297570 
blood1 / 1234788
bone2 / 7165527
bone marrow1 / 4880120
brain5 / 11009894
cervix1 / 4817120
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue1 / 2157224
esophagus0 / 202090 
eye1 / 2110544
heart2 / 8962622
intestine3 / 23447212
kidney0 / 2117770 
larynx1 / 2414541
liver0 / 2077430 
lung6 / 33697417
lymph0 / 442700 
lymph node3 / 9161032
mammary gland3 / 15327119
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary5 / 10205148
pancreas3 / 21481213
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta6 / 28082521
prostate2 / 18934510
salivary gland0 / 201550 
skin4 / 21057418
spleen1 / 5395218
stomach0 / 966190 
testis0 / 3304420 
thymus1 / 8113112
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus1 / 2328784
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 205333_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts13.95
Adipocyte9.45
AdrenalCortex11.7
Adrenalgland9.2
Amygdala8.65
Appendix9.2
AtrioventricularNode8.05
BDCA4+_DentriticCells10.35
Bonemarrow9.8
BronchialEpithelialCells9.4
CD105+_Endothelial12.65
CD14+_Monocytes12.35
CD19+_BCells(neg._sel.)10.6
CD33+_Myeloid14.95
CD34+11.7
CD4+_Tcells10.6
CD56+_NKCells11.6
CD71+_EarlyErythroid14.05
CD8+_Tcells9.45
CardiacMyocytes11.55
Caudatenucleus9.55
Cerebellum9.25
CerebellumPeduncles11.05
CiliaryGanglion6.85
CingulateCortex9.8
Colorectaladenocarcinoma9.8
DorsalRootGanglion7.65
FetalThyroid9.4
Fetalbrain10.8
Fetalliver8.15
Fetallung8
GlobusPallidus7.9
Heart12.65
Hypothalamus10.35
Kidney8.05
Leukemia_chronicMyelogenousK-56212.15
Leukemia_promyelocytic-HL-608.85
Leukemialymphoblastic(MOLT-4)7.85
Liver12.7
Lung9.4
Lymphnode8.45
Lymphoma_burkitts(Daudi)12.8
Lymphoma_burkitts(Raji)13.1
MedullaOblongata8.05
OccipitalLobe9.75
OlfactoryBulb7.55
Ovary7.75
Pancreas8
PancreaticIslet10.2
ParietalLobe9.95
Pituitary11.7
Placenta10.1
Pons9.6
PrefrontalCortex11.6
Prostate10.35
Salivarygland8.25
SkeletalMuscle13.75
Skin7.4
SmoothMuscle11.15
Spinalcord10.35
SubthalamicNucleus10
SuperiorCervicalGanglion11.2
TemporalLobe8.75
Testis10.55
TestisGermCell7.45
TestisIntersitial7.55
TestisLeydigCell9.55
TestisSeminiferousTubule8.8
Thalamus16.05
Thymus7.7
Thyroid11.9
Tongue10.8
Tonsil9.35
Trachea9.3
TrigeminalGanglion10.7
Uterus6.5
UterusCorpus8.35
WholeBlood8.95
Wholebrain7.7
colon8.55
pineal_day10.62
pineal_night10.34
retina11.625
small_intestine8.45
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P1641
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.82 ± 0.68
Basal Forebrain4.48 ± 0.36
Basal Part of Pons4.33 ± 0.21
Cerebellar Cortex4.85 ± 0.28
Cerebellar Nuclei4.21 ± 0.59
Claustrum5.19 ± 0.59
Epithalamus3.91 ± 0.31
Frontal Lobe4.26 ± 0.47
Globus Pallidus3.91 ± 0.37
Hypothalamus4.43 ± 0.5
Insula4.12 ± 0.66
Limbic Lobe4.52 ± 0.53
Mesencephalon4.54 ± 0.56
Myelencephalon4.46 ± 0.56
Occipital Lobe4.53 ± 0.66
Parietal Lobe4.4 ± 0.52
Pontine Tegmentum4.28 ± 0.65
Striatum4.25 ± 0.46
Subthalamus4.62 ± 0.4
Temporal Lobe4.43 ± 0.53
Thalamus4.32 ± 0.52
White Matter4.58 ± 0.18
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Rce1CBCerebellum23.41
27.33
Rce1CTXCerebral cortex61.36
42.46
Rce1HIPHippocampal region38.62
41.88
Rce1HPFHippocampal formation46.99
42.5
Rce1HYHypothalamus25.23
17.84
Rce1LSXLateral septal complex35.07
24.45
Rce1MBMidbrain28.31
23.9
Rce1MYMedulla29.5
28.27
Rce1OLFOlfactory bulb51.27
39.54
Rce1PPons28.71
25.77
Rce1PALPallidum26.94
20.92
Rce1RHPRetrohippocampal region57.94
42.83
Rce1sAMYStriatum-like amygdalar nuclei35.17
22.09
Rce1STRStriatum48.29
33.3
Rce1STRdStriatum dorsal region52.77
37.62
Rce1STRvStriatum ventral region45.45
28.76
Rce1THThalamus31.24
23.26
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
FACE2_HUMAN_2 9 2 10 AALGGDGLR PRIDE
FACE2_HUMAN_65 6 65 70 PAVIKR PRIDE

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved