Annotation Detail for CDH2
Basic Information Top
| Gene Symbol: | CDH2 ( CD325,CDHN,CDw325,NCAD ) |
|---|---|
| Gene Full Name: | cadherin 2, type 1, N-cadherin (neuronal) |
| Band: | 18q12.1 |
| Quick Links | Entrez ID:1000; OMIM: 114020; Uniprot ID:CADH2_HUMAN; ENSEMBL ID: ENSG00000170558; HGNC ID: 1759 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 190 | N-linked (GlcNAc...) (Potential). | |
| 273 | N-linked (GlcNAc...). | |
| 325 | N-linked (GlcNAc...) (Potential). | |
| 402 | N-linked (GlcNAc...). | |
| 572 | N-linked (GlcNAc...). | |
| 651 | N-linked (GlcNAc...) (Potential). | |
| 692 | N-linked (GlcNAc...). | |
| 785 | Phosphotyrosine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 190 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 273 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 325 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 402 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 572 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 651 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 692 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 785 | Phosphotyrosine. | Swiss-Prot 53.0 |
| 852 | Phosphotyrosine (Src) | Phospho.ELM 6.0 |
| 884 | Phosphotyrosine (Src) | Phospho.ELM 6.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 41 | Phosphotyrosine(Syk) | HMM predict |
| 41 | Phosphotyrosine(SRC) | HMM predict |
| 74 | Phosphoserine(ATM) | HMM predict |
| 135 | Phosphoserine(PKG) | HMM predict |
| 196 | Phosphoserine(IKK) | HMM predict |
| 273 | N-linked | HMM predict |
| 280 | O-linked | HMM predict |
| 314 | Phosphoserine(IKK) | HMM predict |
| 314 | O-linked | HMM predict |
| 315 | O-linked | HMM predict |
| 315 | Phosphothreonine(MAPK) | HMM predict |
| 315 | Phosphothreonine(CDK) | HMM predict |
| 325 | N-linked | HMM predict |
| 357 | N-linked | HMM predict |
| 365 | O-linked | HMM predict |
| 367 | O-linked | HMM predict |
| 402 | N-linked | HMM predict |
| 445 | Phosphothreonine(PKC) | HMM predict |
| 480 | O-linked | HMM predict |
| 481 | O-linked | HMM predict |
| 483 | O-linked | HMM predict |
| 527 | Phosphotyrosine(INSR) | HMM predict |
| 572 | N-linked | HMM predict |
| 586 | O-linked | HMM predict |
| 620 | Phosphoserine(IKK) | HMM predict |
| 622 | N-linked | HMM predict |
| 628 | Sulfotyrosine | HMM predict |
| 644 | Phosphoserine(CDC2) | HMM predict |
| 651 | N-linked | HMM predict |
| 676 | Phosphotyrosine(INSR) | HMM predict |
| 785 | Phosphotyrosine(Jak) | HMM predict |
| 785 | Sulfotyrosine | HMM predict |
| 785 | Phosphotyrosine(INSR) | HMM predict |
| 788 | Phosphoserine(ATM) | HMM predict |
| 824 | O-linked | HMM predict |
| 865 | Phosphoserine(IKK) | HMM predict |
| 874 | N-linked | HMM predict |
| 875 | Phosphoserine(CK1) | HMM predict |
| 876 | Phosphoserine(CK1) | HMM predict |
| 878 | Phosphoserine(CK1) | HMM predict |
| 884 | Phosphotyrosine(SRC) | HMM predict |
| 884 | Phosphotyrosine(EGFR) | HMM predict |
- RefSeq ID: NM_001792
- Location:chr18 23784933-24011188
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 24011155 | 24011701 | 546 | 240 |
| Oct1 | H2O2-Hela | GSE14283 | 24023434 | 24023464 | 30 | 12261 |
| Oct1 | Hela | GSE14283 | 24023434 | 24023488 | 54 | 12273 |
| hScc1 | Bcell | GSE12603 | 24011343 | 24011701 | 358 | 334 |
| hScc1 | Bcell | GSE12603 | 24023411 | 24023683 | 272 | 12359 |
| hScc1 | CdLS | GSE12603 | 24023411 | 24023820 | 409 | 12427 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 24009354 | 24010743 | 1389 | 0 |
| ER | E2-MCF7 | GSE14664 | 23847989 | 23848024 | 35 | 0 |
| ER | Fulvestrant-MCF7 | GSE14664 | 23990962 | 23990996 | 34 | 0 |
| GABP | Hela | GSE8489 | 23990311 | 23991174 | 863 | 0 |
| H3K27me3 | colorectal | cancer | 24008774 | 24009393 | 619 | 0 |
| H3ac | HepG2 | E | 24008044 | 24009230 | 1186 | 0 |
| H3ac | HepG2 | E | 24010078 | 24010489 | 411 | 0 |
| Nanog | hES | GSE18292 | 23798835 | 23799247 | 412 | 0 |
| Nanog | hES | GSE18292 | 23920705 | 23921105 | 400 | 0 |
| Nanog | hES | GSE18292 | 23989193 | 23989625 | 432 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 23931344 | 23931385 | 41 | 0 |
| Oct1 | Hela | GSE14283 | 23847989 | 23848022 | 33 | 0 |
| Oct1 | Hela | GSE14283 | 23931345 | 23931384 | 39 | 0 |
| Oct1 | Hela | GSE14283 | 23960089 | 23960136 | 47 | 0 |
| Oct1 | Hela | GSE14283 | 23972006 | 23972042 | 36 | 0 |
| Oct1 | Hela | GSE14283 | 23990962 | 23990997 | 35 | 0 |
| Oct1 | Hela | GSE14283 | 24006942 | 24006971 | 29 | 0 |
| P300 | T0-glioblastoma | GSE21026 | 23981440 | 23982240 | 800 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 23830628 | 23831241 | 613 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 23899327 | 23899812 | 485 | 0 |
| hScc1 | Bcell | GSE12603 | 23962662 | 23962810 | 148 | 0 |
| hScc1 | Bcell | GSE12603 | 24009393 | 24010132 | 739 | 0 |
Validated miRNA targets