AutismKB 2.0

Annotation Detail for ABI1


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Basic Information Top
Gene Symbol:ABI1 ( ABI-1,E3B1,NAP1BP,SSH3BP,SSH3BP1 )
Gene Full Name: abl-interactor 1
Band: 10p12.1
Quick LinksEntrez ID:10006; OMIM: 603050; Uniprot ID:ABI1_HUMAN; ENSEMBL ID: ENSG00000136754; HGNC ID: 11320
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
2N-acetylalanine.
183Phosphoserine.
213Phosphotyrosine.
216Phosphoserine.
222Phosphoserine (By similarity).
225Phosphoserine.
333Phosphotyrosine.
455Phosphotyrosine (By similarity).
Location(AA) Modifications Resource
183Phosphoserine (By similarity).Swiss-Prot 53.0
197PhosphotyrosinePhospho.ELM 6.0
212PhosphotyrosinePhospho.ELM 6.0
225Phosphoserine.Swiss-Prot 53.0
332PhosphotyrosinePhospho.ELM 6.0
333Phosphotyrosine.Swiss-Prot 53.0
Location(AA) Modification Resource
25N-linkedHMM predict
88Phosphoserine(PKA)HMM predict
94Phosphoserine(ATM)HMM predict
117N-linkedHMM predict
174O-linkedHMM predict
183O-linkedHMM predict
183Phosphoserine(CDC2)HMM predict
183Phosphoserine(MAPK)HMM predict
187O-linkedHMM predict
187O-linkedHMM predict
189MethylarginineHMM predict
196PhosphothreonineHMM predict
200Phosphothreonine(PKC)HMM predict
216Phosphoserine(CDC2)HMM predict
222Phosphoserine(ATM)HMM predict
222Phosphoserine(IKK)HMM predict
231Phosphoserine(CAMK2)HMM predict
240O-linkedHMM predict
240Phosphoserine(IKK)HMM predict
242O-linkedHMM predict
252Phosphoserine(IKK)HMM predict
252Phosphoserine(CK1)HMM predict
254Phosphoserine(CK1)HMM predict
265O-linkedHMM predict
265Phosphothreonine(CDK)HMM predict
267O-linkedHMM predict
267Phosphoserine(CDC2)HMM predict
275N-linkedHMM predict
277O-linkedHMM predict
282O-linkedHMM predict
297O-linkedHMM predict
305Phosphoserine(IKK)HMM predict
309Phosphoserine(IKK)HMM predict
309Phosphoserine(ATM)HMM predict
322N-linkedHMM predict
323Phosphoserine(PKB)HMM predict
323Phosphoserine(IKK)HMM predict
323Phosphoserine(PKA)HMM predict
325O-linkedHMM predict
326Phosphoserine(CK1)HMM predict
327O-linkedHMM predict
328O-linkedHMM predict
333Phosphotyrosine(Jak)HMM predict
338Phosphoserine(PKB)HMM predict
338Phosphoserine(IKK)HMM predict
340O-linkedHMM predict
355Phosphotyrosine(INSR)HMM predict
356Phosphoserine(ATM)HMM predict
361O-linkedHMM predict
392Phosphoserine(CDC2)HMM predict
410Phosphoserine(CDK)HMM predict
410Phosphoserine(ATM)HMM predict
421Phosphotyrosine(Syk)HMM predict
421SulfotyrosineHMM predict
435Phosphotyrosine(Syk)HMM predict
457SulfotyrosineHMM predict
492Phosphothreonine(PKA)HMM predict
493GlycineHMM predict
504MethionineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001012750
  • Location:chr10 27075532-27189964
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Rb QuiescentGSE19898 27189675 27190264 589 5
TFAP2C MCF7GSE21234 27208692 27208943 251 18853
p130 shRbSenescentGSE19898 27189718 27190252 534 21
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 27189038 27190513 1475 0
Fos K562GSE19551 27084349 27084809 460 0
FoxA1 MCF7MACSdata 27133892 27134117 225 0
GABP HelaGSE8489 27131204 27131561 357 0
H3K4me3 colorectalcancer 27187748 27189003 1255 0
H3ac HepG2E 27186851 27189134 2283 0
Myc K562GSE19551 27139379 27139842 463 0
PHF8 293TGSE20725 27189192 27190043 851 0
PHF8 HeLaGSE20725 27188930 27190050 1120 0
Rb GrowingGSE19898 27189031 27189246 215 0
Rb GrowingGSE19898 27189731 27190041 310 0
Rb SenescentGSE19898 27189745 27190078 333 0
TAF k562GSE8489 27186812 27189070 2258 0
TFAP2C MCF7GSE21234 27109893 27110589 696 0
hScc1 BcellGSE12603 27186890 27187364 474 0
hScc1 BcellGSE12603 27189321 27190443 1122 0
hScc1 CdLSGSE12603 27186812 27187673 861 0
hScc1 CdLSGSE12603 27189003 27190443 1440 0
p130 QuiescentGSE19898 27189130 27189357 227 0
p130 QuiescentGSE19898 27189732 27190019 287 0
p130 SenescentGSE19898 27189637 27190189 552 0
p130 shRbSenescentGSE19898 27189420 27189658 238 0
p63 keratinocytesGSE17611 27187237 27188178 941 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
2931 mRNA TPRT chr10 27026600 27075730 198 mRNA ABI1 chr10 27075532 27189965Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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