AutismKB 2.0

Annotation Detail for KCNE3


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Basic Information Top
Gene Symbol:KCNE3 ( DKFZp781H21101,HOKPP,HYPP,MGC102685,MGC129924,MiRP2 )
Gene Full Name: potassium voltage-gated channel, Isk-related family, member 3
Band: 11q13.4
Quick LinksEntrez ID:10008; OMIM: 604433; Uniprot ID:KCNE3_HUMAN; ENSEMBL ID: ENSG00000175538; HGNC ID: 6243
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
5N-linked (GlcNAc...) (Potential).
22N-linked (GlcNAc...) (Potential).
41N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
5N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
22N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
41N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
22N-linkedHMM predict
28N-linkedHMM predict
41N-linkedHMM predict
49Phosphoserine(PKA)HMM predict
49Phosphoserine(PKC)HMM predict
49Phosphoserine(PKG)HMM predict
49Phosphoserine(CAMK2)HMM predict
49Phosphoserine(PKB)HMM predict
100ValineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_005472
  • Location:chr11 73843535-73856247
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
NRSF pAbJurkat 73856091 73856449 358 23
Oct1 HelaGSE14283 73861048 73861106 58 4830
Oct4 hESGSE17917 73856157 73856585 428 124
hScc1 BcellGSE12603 73856056 73856449 393 5
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 73837994 73838333 339 5372
CTCF CD4GSE12889 73842126 73842350 224 1298
CTCF CD4SISSRdata 73837994 73838333 339 5372
CTCF CD4SISSRdata 73842126 73842350 224 1298
FOXA1 DLD1GSE12801 73831135 73831840 705 12048
Nanog hESGSE18292 73838129 73838446 317 5248
Sox2 hESGSE18292 73838121 73838452 331 5249
hScc1 BcellGSE12603 73837965 73838376 411 5365
hScc1 BcellGSE12603 73842133 73842363 230 1288
hScc1 CdLSGSE12603 73837894 73838376 482 5401
hScc1 CdLSGSE12603 73841875 73842363 488 1417
hScc1 G2GSE9613 73837894 73838376 482 5401
hScc1 G2GSE9613 73841945 73842363 418 1382
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
FOXA1 DLD1GSE12801 73853882 73854589 707 0
FOXA1 MCF7GSE15244 73854014 73854517 503 0
FoxA1 MCF7MACSdata 73854067 73854489 422 0
H3K4me3 colorectalcancer 73855100 73855619 519 0
Oct1 H2O2-HelaGSE14283 73846427 73846453 26 0
Oct1 H2O2-HelaGSE14283 73849041 73849071 30 0
Oct1 HelaGSE14283 73846427 73846457 30 0
Oct1 HelaGSE14283 73849041 73849081 40 0
RARA MCF7GSE15244 73855033 73855327 294 0
RNAII Tamoxifen-MCF7GSE14664 73846420 73846455 35 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018