Annotation Detail for PDCD6


Gene Symbol: | PDCD6 ( ALG-2,FLJ46208,MGC111017,MGC119050,MGC9123,PEF1B ) |
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Gene Full Name: | programmed cell death 6 |
Band: | 5p15.33 |
Quick Links | Entrez ID:10016; OMIM: 601057; Uniprot ID:PDCD6_HUMAN; ENSEMBL ID: ENSG00000063438,ENSG00000249915; HGNC ID: 8765 |
Relate to Another Database: | SFARIGene; denovo-db |
No data |
No data |
Location(AA) | Modification | Resource |
---|---|---|
7 | Methylarginine | HMM predict |
54 | N-linked | HMM predict |
81 | N-linked | HMM predict |
183 | Phosphotyrosine(Syk) | HMM predict |
185 | Serine | HMM predict |
- RefSeq ID: NM_013232
- Location:chr5 324735-368088
- strand:+
Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
---|---|---|---|---|---|---|
CTCF | G2 | GSE9613 | 317544 | 317719 | 175 | 7104 |
Fos | K562 | GSE19551 | 324166 | 325021 | 855 | 142 |
Myc | K562 | GSE19551 | 324175 | 325082 | 907 | 107 |
Myc | hES | GSE17917 | 324460 | 324747 | 287 | 132 |
Nanog | hES | GSE18292 | 324456 | 324718 | 262 | 149 |
PHF8 | 293T | GSE20725 | 323794 | 325076 | 1282 | 301 |
PHF8 | HeLa | GSE20725 | 323939 | 325483 | 1544 | 25 |
PHF8 | Hs68plusFBS | GSE20725 | 323843 | 325157 | 1314 | 236 |
TAFII | hES | GSE17917 | 324482 | 324917 | 435 | 36 |
TFAP2C | MCF7 | GSE21234 | 324158 | 324912 | 754 | 201 |
p130 | Quiescent | GSE19898 | 324419 | 324841 | 422 | 106 |
p130 | Senescent | GSE19898 | 324400 | 324807 | 407 | 132 |
p130 | shRbSenescent | GSE19898 | 324441 | 324798 | 357 | 116 |
No data |
Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
---|---|---|---|---|---|---|
CBP | Jurkat | GSE17954 | 354230 | 356718 | 2488 | 0 |
CTCF | G2 | GSE9613 | 324465 | 326496 | 2031 | 0 |
CTCF | G2 | GSE9613 | 333244 | 333893 | 649 | 0 |
CTCF | G2 | GSE9613 | 334442 | 334682 | 240 | 0 |
CTCF | G2 | GSE9613 | 343390 | 343715 | 325 | 0 |
CTCF | G2 | GSE9613 | 345874 | 347121 | 1247 | 0 |
CTCF | G2 | GSE9613 | 349338 | 349685 | 347 | 0 |
CTCF | G2 | GSE9613 | 351421 | 352344 | 923 | 0 |
CTCF | G2 | GSE9613 | 358119 | 358709 | 590 | 0 |
CTCF | G2 | GSE9613 | 362019 | 362261 | 242 | 0 |
CTCF | G2 | GSE9613 | 362684 | 362919 | 235 | 0 |
CTCF | G2 | GSE9613 | 365142 | 365313 | 171 | 0 |
ER | MCF7 | GSE19013 | 354543 | 356109 | 1566 | 0 |
ETS1 | Jurkat | GSE17954 | 324113 | 325677 | 1564 | 0 |
GABP | k562 | GSE8489 | 325374 | 326496 | 1122 | 0 |
H3K4me2 | HCT116 | GSE10453 | 325374 | 327103 | 1729 | 0 |
H3K4me3 | colorectal | cancer | 325417 | 326311 | 894 | 0 |
H3ac | HepG2 | E | 325270 | 328162 | 2892 | 0 |
TAF | Hela | GSE8489 | 325374 | 326421 | 1047 | 0 |
TAF | Hela | GSE8489 | 333933 | 334584 | 651 | 0 |
TAF | k562 | GSE8489 | 325298 | 327429 | 2131 | 0 |
TFAP2C | MCF7 | GSE21234 | 328704 | 329244 | 540 | 0 |
hScc1 | Bcell | GSE12603 | 324426 | 325374 | 948 | 0 |
hScc1 | Bcell | GSE12603 | 344347 | 344523 | 176 | 0 |
hScc1 | Bcell | GSE12603 | 362717 | 363162 | 445 | 0 |
Micro RNA Name | Stem Loop Name | The chromosome that miRNA located | Publication |
---|---|---|---|
hsa-let-7a | hsa-let-7a-1 | 9 | 18719242 |
hsa-let-7a | hsa-let-7a-2 | 11 | 18719242 |
hsa-let-7a | hsa-let-7a-3 | 22 | 18719242 |
hsa-let-7a | hsa-let-7a-1 | 9 | 18367718 |
hsa-let-7a | hsa-let-7a-2 | 11 | 18367718 |
hsa-let-7a | hsa-let-7a-3 | 22 | 18367718 |
hsa-let-7a | hsa-let-7a-1 | 9 | 15024405 |
hsa-let-7a | hsa-let-7a-2 | 11 | 15024405 |
hsa-let-7a | hsa-let-7a-3 | 22 | 15024405 |
hsa-let-7a* | hsa-let-7a-1 | 9 | 18719242 |
hsa-let-7a* | hsa-let-7a-3 | 22 | 18719242 |
hsa-let-7a* | hsa-let-7a-1 | 9 | 18367718 |
hsa-let-7a* | hsa-let-7a-3 | 22 | 18367718 |
hsa-let-7a* | hsa-let-7a-1 | 9 | 15024405 |
hsa-let-7a* | hsa-let-7a-3 | 22 | 15024405 |
hsa-let-7b | hsa-let-7b | 22 | 18719242 |
hsa-let-7b | hsa-let-7b | 22 | 18367718 |
hsa-let-7b | hsa-let-7b | 22 | 15024405 |
hsa-let-7b* | hsa-let-7b | 22 | 18719242 |
hsa-let-7b* | hsa-let-7b | 22 | 18367718 |
hsa-let-7b* | hsa-let-7b | 22 | 15024405 |
hsa-let-7c | hsa-let-7c | 21 | 18719242 |
hsa-let-7c | hsa-let-7c | 21 | 18367718 |
hsa-let-7c | hsa-let-7c | 21 | 15024405 |
hsa-let-7c* | hsa-let-7c | 21 | 18719242 |
hsa-let-7c* | hsa-let-7c | 21 | 18367718 |
hsa-let-7c* | hsa-let-7c | 21 | 15024405 |
hsa-let-7d | hsa-let-7d | 9 | 18719242 |
hsa-let-7d | hsa-let-7d | 9 | 18367718 |
hsa-let-7d | hsa-let-7d | 9 | 15024405 |
hsa-let-7d* | hsa-let-7d | 9 | 18719242 |
hsa-let-7d* | hsa-let-7d | 9 | 18367718 |
hsa-let-7d* | hsa-let-7d | 9 | 15024405 |
hsa-let-7e | hsa-let-7e | 19 | 18719242 |
hsa-let-7e | hsa-let-7e | 19 | 18367718 |
hsa-let-7e | hsa-let-7e | 19 | 15024405 |
hsa-let-7e* | hsa-let-7e | 19 | 18719242 |
hsa-let-7e* | hsa-let-7e | 19 | 18367718 |
hsa-let-7e* | hsa-let-7e | 19 | 15024405 |
hsa-let-7f | hsa-let-7f-1 | 9 | 18719242 |
hsa-let-7f | hsa-let-7f-2 | X | 18719242 |
hsa-let-7f | hsa-let-7f-1 | 9 | 18367718 |
hsa-let-7f | hsa-let-7f-2 | X | 18367718 |
hsa-let-7f | hsa-let-7f-1 | 9 | 15024405 |
hsa-let-7f | hsa-let-7f-2 | X | 15024405 |
hsa-let-7f-1* | hsa-let-7f-1 | 9 | 18719242 |
hsa-let-7f-1* | hsa-let-7f-1 | 9 | 18367718 |
hsa-let-7f-1* | hsa-let-7f-1 | 9 | 15024405 |
hsa-let-7f-2* | hsa-let-7f-2 | X | 18719242 |
hsa-let-7f-2* | hsa-let-7f-2 | X | 18367718 |
hsa-let-7f-2* | hsa-let-7f-2 | X | 15024405 |
hsa-let-7g | hsa-let-7g | 3 | 18719242 |
hsa-let-7g | hsa-let-7g | 3 | 18367718 |
hsa-let-7g | hsa-let-7g | 3 | 15024405 |
hsa-let-7g* | hsa-let-7g | 3 | 18719242 |
hsa-let-7g* | hsa-let-7g | 3 | 18367718 |
hsa-let-7g* | hsa-let-7g | 3 | 15024405 |
hsa-let-7i | hsa-let-7i | 12 | 18719242 |
hsa-let-7i | hsa-let-7i | 12 | 18367718 |
hsa-let-7i | hsa-let-7i | 12 | 15024405 |
hsa-let-7i* | hsa-let-7i | 12 | 18719242 |
hsa-let-7i* | hsa-let-7i | 12 | 18367718 |
hsa-let-7i* | hsa-let-7i | 12 | 15024405 |
No data |