AutismKB 2.0

Annotation Detail for RANBP9


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Basic Information Top
Gene Symbol:RANBP9 ( BPM-L,BPM90,RANBPM,RanBP7 )
Gene Full Name: RAN binding protein 9
Band: 6p23
Quick LinksEntrez ID:10048; OMIM: 603854; Uniprot ID:RANB9_HUMAN; ENSEMBL ID: ENSG00000010017; HGNC ID: 13727
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
405N6-acetyllysine.
603Phosphoserine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
20O-linkedHMM predict
20Phosphoserine(ATM)HMM predict
20Phosphoserine(CDC2)HMM predict
31O-linkedHMM predict
42O-linkedHMM predict
42O-linkedHMM predict
46O-linkedHMM predict
46Phosphoserine(CDC2)HMM predict
46Phosphoserine(IKK)HMM predict
50O-linkedHMM predict
50Phosphoserine(CDC2)HMM predict
79O-linkedHMM predict
94O-linkedHMM predict
94O-linkedHMM predict
100O-linkedHMM predict
163Phosphothreonine(MAPK)HMM predict
170Phosphoserine(IKK)HMM predict
229Phosphotyrosine(INSR)HMM predict
229Phosphotyrosine(Syk)HMM predict
261Phosphoserine(IKK)HMM predict
289N-linkedHMM predict
290N-linkedHMM predict
320Phosphothreonine(MAPK)HMM predict
376Phosphotyrosine(Jak)HMM predict
454N-linkedHMM predict
470Phosphoserine(IKK)HMM predict
477Phosphoserine(MAPK)HMM predict
482Phosphoserine(IKK)HMM predict
483O-linkedHMM predict
483Phosphoserine(CDC2)HMM predict
483Phosphoserine(CDK)HMM predict
487Phosphoserine(CDK)HMM predict
487PhosphoserineHMM predict
550Phosphoserine(ATM)HMM predict
555N-linkedHMM predict
559N-linkedHMM predict
568SulfotyrosineHMM predict
582N-linkedHMM predict
663Phosphoserine(CDC2)HMM predict
719S-farnesylHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_005493
  • Location:chr6 13729709-13819774
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 13820165 13820455 290 536
CTCF G2GSE9613 13823026 13823204 178 3341
ER MCF7GSE19013 13833686 13834229 543 14183
FOXA1 MCF7GSE15244 13833332 13834180 848 13982
FoxA1 MCF7MACSdata 13833309 13833530 221 13645
H3K4me3 colorectalcancer 13820528 13821019 491 999
H3ac HepG2E 13820564 13821282 718 1149
Oct1 H2O2-HelaGSE14283 13825685 13825711 26 5924
Oct1 HelaGSE14283 13825685 13825715 30 5926
Oct1 HelaGSE14283 13835063 13835138 75 15326
PHF8 293TGSE20725 13818949 13820880 1931 140
PHF8 HeLaGSE20725 13819014 13820822 1808 144
RARA MCF7GSE15244 13833081 13834180 1099 13856
RARG MCF7GSE15244 13833081 13834180 1099 13856
Rb GrowingGSE19898 13839637 13839752 115 19920
Rb QuiescentGSE19898 13820482 13820624 142 779
TAF k562GSE8489 13820564 13821282 718 1149
TFAP2C MCF7GSE21234 13832336 13832994 658 12891
TFAP2C MCF7GSE21234 13837284 13837818 534 17777
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 13733043 13733344 301 0
CTCF CD4SISSRdata 13733043 13733344 301 0
CTCF G2GSE9613 13733005 13733644 639 0
CTCF G2GSE9613 13818773 13819847 1074 0
ER E2-MCF7GSE14664 13789928 13790017 89 0
Fos K562GSE19551 13796771 13797447 676 0
GABP k562GSE8489 13769008 13769926 918 0
H3K4me3 colorectalcancer 13817535 13819249 1714 0
H3ac HepG2E 13816637 13818963 2326 0
Myc K562GSE19551 13786606 13786966 360 0
Oct1 HelaGSE14283 13818746 13818773 27 0
TAF HelaGSE8489 13767534 13767863 329 0
TAF k562GSE8489 13769008 13769926 918 0
TAF k562GSE8489 13787013 13788191 1178 0
TAF k562GSE8489 13808835 13809494 659 0
TAF k562GSE8489 13811528 13812524 996 0
TAF k562GSE8489 13816637 13818815 2178 0
TFAP2C MCF7GSE21234 13818581 13819011 430 0
hScc1 BcellGSE12603 13818917 13819847 930 0
hScc1 CdLSGSE12603 13818288 13819847 1559 0
hScc1 G2GSE9613 13733047 13733578 531 0
p130 QuiescentGSE19898 13817732 13817963 231 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
22150 EST chr6 13728639 13740896 129 mRNA RANBP9 chr6 13729709 13819775Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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