Annotation Detail for NR1H3
Basic Information Top
| Gene Symbol: | NR1H3 ( LXR-a,LXRA,RLD-1 ) |
|---|---|
| Gene Full Name: | nuclear receptor subfamily 1, group H, member 3 |
| Band: | 11p11.2 |
| Quick Links | Entrez ID:10062; OMIM: 602423; Uniprot ID:NR1H3_HUMAN; ENSEMBL ID: ENSG00000025434; HGNC ID: 7966 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 30 | O-linked | HMM predict |
| 30 | Phosphoserine(CK1) | HMM predict |
| 30 | Phosphoserine(ATM) | HMM predict |
| 49 | O-linked | HMM predict |
| 85 | Methyllysine | HMM predict |
| 86 | Methyllysine | HMM predict |
| 198 | Phosphoserine(CDC2) | HMM predict |
| 198 | Phosphoserine(PKB) | HMM predict |
| 430 | Leucine | HMM predict |
- RefSeq ID: NM_005693
- Location:chr11 47237308-47246971
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| H3ac | HepG2 | E | 47235911 | 47236611 | 700 | 1048 |
| TFAP2C | MCF7 | GSE21234 | 47235193 | 47236071 | 878 | 1677 |
| p130 | Quiescent | GSE19898 | 47232687 | 47233029 | 342 | 4451 |
| p130 | Quiescent | GSE19898 | 47235663 | 47235829 | 166 | 1563 |
| p130 | Quiescent | GSE19898 | 47235886 | 47236310 | 424 | 1211 |
| p130 | Senescent | GSE19898 | 47235607 | 47236189 | 582 | 1411 |
| p130 | shRbSenescent | GSE19898 | 47235592 | 47235924 | 332 | 1551 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| FOXA1 | MCF7 | GSE15244 | 47246625 | 47247401 | 776 | 42 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 47237692 | 47237880 | 188 | 0 |
| CTCF | CD4 | SISSRdata | 47237692 | 47237880 | 188 | 0 |
| Fos | K562 | GSE19551 | 47243365 | 47243751 | 386 | 0 |
| H3ac | HepG2 | E | 47237210 | 47237409 | 199 | 0 |
| RARG | MCF7 | GSE15244 | 47246503 | 47247328 | 825 | 0 |
| hScc1 | Bcell | GSE12603 | 47237210 | 47238089 | 879 | 0 |
| hScc1 | Bcell | GSE12603 | 47245945 | 47246202 | 257 | 0 |
| hScc1 | CdLS | GSE12603 | 47237210 | 47238089 | 879 | 0 |
| Micro RNA Name | Stem Loop Name | The chromosome that miRNA located | Publication |
|---|---|---|---|
| hsa-miR-613 | hsa-mir-613 | 12 | 21310851 |
| No data |
Cis-Nats regulation