Annotation Detail for CDH10
Basic Information Top
| Gene Symbol: | CDH10 ( - ) |
|---|---|
| Gene Full Name: | cadherin 10, type 2 (T2-cadherin) |
| Band: | 5p14.2-p14.1 |
| Quick Links | Entrez ID:1008; OMIM: 604555; Uniprot ID:CAD10_HUMAN; ENSEMBL ID: ENSG00000040731; HGNC ID: 1749 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 256 | N-linked (GlcNAc...) (Potential). | |
| 438 | N-linked (GlcNAc...) (Potential). | |
| 456 | N-linked (GlcNAc...) (Potential). | |
| 534 | N-linked (GlcNAc...) (Potential). | |
| 784 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 256 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 438 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 456 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 534 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 15 | S-palmitoyl | HMM predict |
| 38 | Phosphoserine(PKA) | HMM predict |
| 185 | O-linked | HMM predict |
| 210 | Phosphoserine(ATM) | HMM predict |
| 256 | N-linked | HMM predict |
| 282 | Phosphoserine(CDC2) | HMM predict |
| 331 | Phosphothreonine(PKC) | HMM predict |
| 374 | Phosphoserine(PKG) | HMM predict |
| 413 | Phosphoserine(IKK) | HMM predict |
| 438 | N-linked | HMM predict |
| 456 | N-linked | HMM predict |
| 534 | N-linked | HMM predict |
| 540 | N-linked | HMM predict |
| 549 | Phosphothreonine(PKC) | HMM predict |
| 579 | O-linked | HMM predict |
| 749 | Phosphoserine(CK1) | HMM predict |
| 750 | Phosphoserine(CK1) | HMM predict |
| 750 | O-linked | HMM predict |
| 784 | Phosphoserine(ATM) | HMM predict |
- RefSeq ID: NM_006727
- Location:chr5 24522966-24680667
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Oct4 | ES | GSE20650 | 24680629 | 24681052 | 423 | 173 |
| Oct4 | hES | GSE17917 | 24680633 | 24681054 | 421 | 176 |
| Oct4 | hES | GSE21916 | 24680560 | 24681138 | 578 | 182 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ER | Fulvestrant-MCF7 | GSE14664 | 24505978 | 24506032 | 54 | 16962 |
| TAF | Hela | GSE8489 | 24517773 | 24518401 | 628 | 4880 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 24677880 | 24678151 | 271 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 24550381 | 24550409 | 28 | 0 |
| STAT1 | HeLa | GSE12782 | 24573245 | 24576254 | 3009 | 0 |
| STAT1 | HeLa | GSE12783 | 24573840 | 24577423 | 3583 | 0 |
| TAF | Hela | GSE8489 | 24613818 | 24614497 | 679 | 0 |
| USF1 | HepG2 | E | 24647311 | 24647456 | 145 | 0 |
| hScc1 | G2 | GSE9613 | 24677774 | 24678213 | 439 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20773 | HTC | chr5 | 24589883 | 24649088 | 59205 | mRNA | CDH10 | chr5 | 24522966 | 24680668 | Non-exonic Bidirectional (NOB) pairs | |