AutismKB 2.0

Annotation Detail for COL4A3BP


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Basic Information Top
Gene Symbol:COL4A3BP ( CERT,CERTL,FLJ20597,GPBP,STARD11 )
Gene Full Name: collagen, type IV, alpha 3 (Goodpasture antigen) binding protein
Band: 5q13.3
Quick LinksEntrez ID:10087; OMIM: 604677; Uniprot ID:C43BP_HUMAN; ENSEMBL ID: ENSG00000113163; HGNC ID: 2205
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
132Phosphoserine; by PKD.
315Phosphoserine.
327FFAT.
377Phosphoserine.
380Phosphoserine.
611Phosphoserine (By similarity).
Location(AA) Modifications Resource
302PhosphoserinePhospho.ELM 6.0
315Phosphoserine.Swiss-Prot 53.0
377Phosphoserine (By similarity).Swiss-Prot 53.0
380Phosphoserine (By similarity).Swiss-Prot 53.0
Location(AA) Modification Resource
6Phosphoserine(IKK)HMM predict
8N-linkedHMM predict
12Phosphoserine(CK1)HMM predict
91N-linkedHMM predict
121Phosphotyrosine(INSR)HMM predict
144O-linkedHMM predict
146O-linkedHMM predict
148O-linkedHMM predict
150Phosphoserine(PKC)HMM predict
251O-linkedHMM predict
287Phosphothreonine(PKC)HMM predict
287Phosphothreonine(PKA)HMM predict
291Phosphotyrosine(Syk)HMM predict
309Phosphotyrosine(INSR)HMM predict
309Phosphotyrosine(EGFR)HMM predict
309SulfotyrosineHMM predict
340Phosphoserine(ATM)HMM predict
377Phosphoserine(PKB)HMM predict
377Phosphoserine(IKK)HMM predict
379Phosphoserine(CK1)HMM predict
560Phosphoserine(MAPK)HMM predict
602Phosphotyrosine(EGFR)HMM predict
610Phosphothreonine(PKA)HMM predict
611Phosphoserine(PKB)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_005713
  • Location:chr5 74710820-74843195
  • strand:-
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
hScc1 BcellGSE12603 74706116 74706481 365 4522
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 74842327 74843553 1226 0
ER E2-MCF7GSE14664 74796753 74796801 48 0
ER Fulvestrant-MCF7GSE14664 74799451 74799487 36 0
FoxA1 MCF7MACSdata 74792165 74792296 131 0
H3K4me3 colorectalcancer 74841216 74842458 1242 0
H3ac HepG2E 74841123 74841737 614 0
H3ac HepG2E 74842021 74842487 466 0
Nanog hESGSE18292 74743173 74743996 823 0
Nanog hESGSE18292 74806918 74807354 436 0
Oct1 HelaGSE14283 74727879 74727920 41 0
Oct1 HelaGSE14283 74755210 74755238 28 0
Oct1 HelaGSE14283 74769702 74769729 27 0
Oct1 HelaGSE14283 74799452 74799484 32 0
Oct1 HelaGSE14283 74804512 74804543 31 0
Oct1 HelaGSE14283 74820345 74820409 64 0
Oct1 HelaGSE14283 74831074 74831103 29 0
TAF HelaGSE8489 74841364 74842458 1094 0
TAF k562GSE8489 74841401 74842390 989 0
TFAP2C MCF7GSE21234 74842341 74842747 406 0
hScc1 BcellGSE12603 74842166 74843186 1020 0
hScc1 CdLSGSE12603 74842131 74843553 1422 0
p63 keratinocytesGSE17611 74789118 74789814 696 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
21131 mRNA POLK chr5 74843336 74930889 156 mRNA COL4A3BP chr5 74705735 74843719Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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