AutismKB 2.0

Annotation Detail for CDH12


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Basic Information Top
Gene Symbol:CDH12 ( CDHB,FLJ34857 )
Gene Full Name: cadherin 12, type 2 (N-cadherin 2)
Band: 5p14.3
Quick LinksEntrez ID:1010; OMIM: 600562; Uniprot ID:CAD12_HUMAN; ENSEMBL ID: ENSG00000154162; HGNC ID: 1751
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
256N-linked (GlcNAc...) (Potential).
286Phosphoserine.
456N-linked (GlcNAc...) (Potential).
537N-linked (GlcNAc...) (Potential).
545N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
256N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
456N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
537N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
545N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
30O-linkedHMM predict
165Phosphotyrosine(Jak)HMM predict
192Phosphotyrosine(INSR)HMM predict
256N-linkedHMM predict
374Phosphoserine(PKG)HMM predict
394Phosphotyrosine(Syk)HMM predict
529Phosphoserine(CDC2)HMM predict
537N-linkedHMM predict
545N-linkedHMM predict
546N-linkedHMM predict
581Phosphoserine(IKK)HMM predict
645Phosphothreonine(PKA)HMM predict
697Phosphoserine(IKK)HMM predict
746Phosphoserine(CK2)HMM predict
746Phosphoserine(IKK)HMM predict
752Phosphoserine(CK1)HMM predict
753Phosphoserine(CK1)HMM predict
756Phosphoserine(CK1)HMM predict
788Phosphotyrosine(Syk)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_004061
  • Location:chr5 21786910-22889487
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 HelaGSE14283 22895153 22895192 39 5685
Oct1 HelaGSE14283 22906007 22906045 38 16539
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 22408126 22408736 610 0
CTCF G2GSE9613 21838749 21838992 243 0
CTCF G2GSE9613 21846282 21846694 412 0
CTCF G2GSE9613 21955275 21955711 436 0
CTCF G2GSE9613 22249977 22250532 555 0
CTCF G2GSE9613 22744685 22744934 249 0
ER E2-MCF7GSE14664 22237887 22237988 101 0
ER E2-MCF7GSE14664 22345349 22345382 33 0
ER Fulvestrant-MCF7GSE14664 21962427 21962464 37 0
FOXA1 MCF7GSE15244 22685010 22685547 537 0
FOXA1 MCF7GSE15244 22792845 22793163 318 0
FoxA1 MCF7MACSdata 22106023 22106578 555 0
FoxA1 MCF7MACSdata 22571973 22572261 288 0
FoxA1 MCF7MACSdata 22685041 22685357 316 0
FoxA1 MCF7MACSdata 22792896 22793211 315 0
NRSF mAbJurkat 22202050 22202278 228 0
NRSF mAbJurkat 22203681 22205513 1832 0
Nanog ESGSE20650 22294087 22294397 310 0
Nanog ESGSE20650 22656831 22657422 591 0
Nanog hESGSE18292 21987521 21987778 257 0
Nanog hESGSE18292 22080927 22081498 571 0
Nanog hESGSE18292 22158414 22158713 299 0
Nanog hESGSE18292 22223703 22223897 194 0
Nanog hESGSE18292 22433899 22434349 450 0
Nanog hESGSE18292 22647254 22647708 454 0
Nanog hESGSE18292 22657051 22657325 274 0
Oct1 H2O2-HelaGSE14283 22087446 22087474 28 0
Oct1 H2O2-HelaGSE14283 22127126 22127152 26 0
Oct1 H2O2-HelaGSE14283 22183584 22183620 36 0
Oct1 H2O2-HelaGSE14283 22221564 22221637 73 0
Oct1 H2O2-HelaGSE14283 22243073 22243155 82 0
Oct1 H2O2-HelaGSE14283 22345347 22345383 36 0
Oct1 H2O2-HelaGSE14283 22653573 22653601 28 0
Oct1 H2O2-HelaGSE14283 22784229 22784262 33 0
Oct1 H2O2-HelaGSE14283 22801160 22801205 45 0
Oct1 HelaGSE14283 21954158 21954232 74 0
Oct1 HelaGSE14283 21954251 21954279 28 0
Oct1 HelaGSE14283 21962428 21962461 33 0
Oct1 HelaGSE14283 22026894 22026928 34 0
Oct1 HelaGSE14283 22183583 22183620 37 0
Oct1 HelaGSE14283 22243074 22243155 81 0
Oct1 HelaGSE14283 22343110 22343144 34 0
Oct1 HelaGSE14283 22521236 22521273 37 0
Oct1 HelaGSE14283 22688513 22688571 58 0
Oct1 HelaGSE14283 22700617 22700651 34 0
Oct1 HelaGSE14283 22770534 22770561 27 0
Oct1 HelaGSE14283 22778268 22778296 28 0
Oct1 HelaGSE14283 22784226 22784264 38 0
Oct1 HelaGSE14283 22797389 22797431 42 0
Oct1 HelaGSE14283 22801160 22801204 44 0
Oct1 HelaGSE14283 22801665 22801697 32 0
Oct1 HelaGSE14283 22831597 22831628 31 0
P300 T30-glioblastomaGSE21026 22408037 22408704 667 0
RARA MCF7GSE15244 22684629 22685665 1036 0
RARA MCF7GSE15244 22798246 22798499 253 0
RNAII Tamoxifen-MCF7GSE14664 22737155 22737190 35 0
RNAII Tamoxifen-MCF7GSE14664 22801160 22801207 47 0
TAF HelaGSE8489 21860470 21860694 224 0
TAF HelaGSE8489 22548426 22548607 181 0
TAF HelaGSE8489 22701861 22702123 262 0
TFAP2C MCF7GSE21234 22106099 22106712 613 0
TFAP2C MCF7GSE21234 22278381 22278797 416 0
TFAP2C MCF7GSE21234 22613265 22613599 334 0
TFAP2C MCF7GSE21234 22684960 22685593 633 0
hScc1 BcellGSE12603 21838749 21838992 243 0
hScc1 BcellGSE12603 21955202 21955737 535 0
hScc1 BcellGSE12603 22249836 22250375 539 0
hScc1 BcellGSE12603 22888791 22889223 432 0
hScc1 CdLSGSE12603 21838749 21839106 357 0
hScc1 CdLSGSE12603 21955275 21955675 400 0
hScc1 CdLSGSE12603 22249732 22250375 643 0
hScc1 G2GSE9613 21838749 21839208 459 0
hScc1 G2GSE9613 21955142 21955814 672 0
hScc1 G2GSE9613 22249695 22250532 837 0
p63 keratinocytesGSE17611 22745575 22746028 453 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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