AutismKB 2.0

Annotation Detail for FAM13A


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Basic Information Top
Gene Symbol:FAM13A ( FAM13A1,FLJ34562,MGC105131 )
Gene Full Name: family with sequence similarity 13, member A
Band: 4q22.1
Quick LinksEntrez ID:10144; OMIM: 613299; Uniprot ID:FA13A_HUMAN; ENSEMBL ID: ENSG00000138640; HGNC ID: 19367
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
655Phosphoserine (By similarity).
732Phosphothreonine (By similarity).
Location(AA) Modifications Resource
329Phosphoserine.Swiss-Prot 53.0
329PhosphoserinePhospho.ELM 6.0
406Phosphothreonine.Swiss-Prot 53.0
Location(AA) Modification Resource
11PhosphoserineHMM predict
31O-linkedHMM predict
32N-linkedHMM predict
56N-linkedHMM predict
57N-linkedHMM predict
66Phosphoserine(CK1)HMM predict
66Phosphoserine(IKK)HMM predict
68Phosphoserine(CK1)HMM predict
68Phosphoserine(IKK)HMM predict
68Phosphoserine(CK2)HMM predict
70Phosphothreonine(PKC)HMM predict
70O-linkedHMM predict
75O-linkedHMM predict
86Phosphoserine(PKC)HMM predict
86Phosphoserine(PKG)HMM predict
106Phosphothreonine(MAPK)HMM predict
166N-linkedHMM predict
213Phosphoserine(CK1)HMM predict
263Phosphoserine(PKB)HMM predict
263Phosphoserine(CK2)HMM predict
263Phosphoserine(CK1)HMM predict
265Phosphoserine(CK2)HMM predict
265Phosphoserine(ATM)HMM predict
265Phosphoserine(CK1)HMM predict
271Phosphoserine(ATM)HMM predict
312O-linkedHMM predict
312Phosphoserine(IKK)HMM predict
312Phosphoserine(CDC2)HMM predict
312Phosphoserine(ATM)HMM predict
324Phosphoserine(PKG)HMM predict
325Phosphoserine(PKA)HMM predict
325Phosphoserine(PKC)HMM predict
325Phosphoserine(PKG)HMM predict
325Phosphoserine(IKK)HMM predict
326Phosphoserine(PKC)HMM predict
330SulfotyrosineHMM predict
330Phosphotyrosine(INSR)HMM predict
413Phosphoserine(IKK)HMM predict
415Phosphothreonine(PKC)HMM predict
461Phosphoserine(CK2)HMM predict
461Phosphoserine(PKG)HMM predict
461Phosphoserine(PKA)HMM predict
462Phosphoserine(CK2)HMM predict
498Phosphothreonine(PKC)HMM predict
530Phosphoserine(CDC2)HMM predict
530Phosphoserine(CDK)HMM predict
533Phosphoserine(CDK)HMM predict
537Phosphoserine(CDK)HMM predict
562Phosphoserine(CK2)HMM predict
562Phosphoserine(CK1)HMM predict
566Phosphoserine(IKK)HMM predict
664Phosphothreonine(MAPK)HMM predict
671Phosphoserine(CK1)HMM predict
673Phosphotyrosine(Syk)HMM predict
679LysineHMM predict
692Phosphothreonine(PKA)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001015045
  • Location:chr4 89866128-89963424
  • strand:-
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 89864856 89865044 188 1179
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 89943600 89944236 636 0
CTCF CD4GSE12889 89931602 89931799 197 0
CTCF CD4GSE12889 89958917 89959193 276 0
CTCF CD4SISSRdata 89931602 89931799 197 0
CTCF CD4SISSRdata 89958917 89959193 276 0
CTCF G2GSE9613 89878503 89878791 288 0
CTCF G2GSE9613 89902496 89902743 247 0
CTCF G2GSE9613 89942875 89943126 251 0
CTCF G2GSE9613 89958755 89959142 387 0
H3K4me3 colorectalcancer 89961036 89961536 500 0
H3K4me3 colorectalcancer 89962674 89963397 723 0
H3ac HepG2E 89897769 89899587 1818 0
Oct1 H2O2-HelaGSE14283 89873496 89873530 34 0
Oct1 HelaGSE14283 89873495 89873529 34 0
P300 T0-glioblastomaGSE21026 89943603 89944266 663 0
P300 T30-glioblastomaGSE21026 89943652 89944431 779 0
PolII HeLaGSE12783 89962122 89964359 2237 0
hScc1 BcellGSE12603 89958755 89959178 423 0
hScc1 CdLSGSE12603 89958473 89959246 773 0
hScc1 G2GSE9613 89958723 89959210 487 0
p130 SenescentGSE19898 89943747 89943995 248 0
p130 shRbSenescentGSE19898 89943782 89944112 330 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
19959 mRNA FAM13A1OS chr4 89988117 90008432 825 mRNA FAM13A1 chr4 90004283 90335501Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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