AutismKB 2.0

Annotation Detail for USPL1


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Basic Information Top
Gene Symbol:USPL1 ( C13orf22,D13S106E,DKFZp781K2286,FLJ32952,RP11-121O19.1,bA121O19.1 )
Gene Full Name: ubiquitin specific peptidase like 1
Band: 13q12.3
Quick LinksEntrez ID:10208; OMIM: NA; Uniprot ID:USPL1_HUMAN; ENSEMBL ID: ENSG00000132952; HGNC ID: 20294
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
60Phosphothreonine(PKC)HMM predict
91Phosphoserine(MAPK)HMM predict
108Phosphoserine(PKA)HMM predict
108Phosphoserine(CK1)HMM predict
128Phosphotyrosine(INSR)HMM predict
146Phosphotyrosine(EGFR)HMM predict
146Phosphotyrosine(Abl)HMM predict
196Phosphothreonine(PKC)HMM predict
196O-linkedHMM predict
200Phosphoserine(CDC2)HMM predict
208Phosphoserine(IKK)HMM predict
220Phosphoserine(IKK)HMM predict
283Phosphoserine(ATM)HMM predict
402Phosphoserine(CK1)HMM predict
502Phosphoserine(ATM)HMM predict
502Phosphoserine(PKG)HMM predict
530Phosphoserine(IKK)HMM predict
533O-linkedHMM predict
548Phosphothreonine(CDK)HMM predict
597Phosphoserine(CAMK2)HMM predict
599Phosphoserine(IKK)HMM predict
680N-linkedHMM predict
681N-linkedHMM predict
693PhosphoserineHMM predict
707Phosphothreonine(MAPK)HMM predict
720Phosphoserine(IKK)HMM predict
734Phosphoserine(IKK)HMM predict
734O-linkedHMM predict
738O-linkedHMM predict
769Phosphoserine(PKA)HMM predict
818Phosphoserine(PKG)HMM predict
820Phosphoserine(PKA)HMM predict
826O-linkedHMM predict
834O-linkedHMM predict
835O-linkedHMM predict
836N-linkedHMM predict
838O-linkedHMM predict
858Phosphoserine(IKK)HMM predict
864N-linkedHMM predict
870N-linkedHMM predict
909Phosphoserine(CDC2)HMM predict
914Phosphothreonine(PKC)HMM predict
928Phosphoserine(IKK)HMM predict
934Phosphoserine(CK1)HMM predict
952Phosphoserine(IKK)HMM predict
961O-linkedHMM predict
965Phosphoserine(ATM)HMM predict
977Phosphoserine(MAPK)HMM predict
982O-linkedHMM predict
986Phosphoserine(CK2)HMM predict
1015Phosphoserine(ATM)HMM predict
1026Phosphotyrosine(INSR)HMM predict
1076N-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_005800
  • Location:chr13 30089919-30131685
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 30074166 30074305 139 15684
CTCF G2GSE9613 30088971 30090490 1519 189
ETS1 JurkatGSE17954 30088975 30090784 1809 40
H3K4me3 colorectalcancer 30088017 30089381 1364 1221
H3ac HepG2E 30087763 30088334 571 1871
H3ac HepG2E 30088803 30089450 647 793
Oct1 HelaGSE14283 30072845 30072876 31 17059
Oct1 HelaGSE14283 30089636 30089663 27 270
RARA MCF7GSE15244 30088937 30089450 513 726
RARG MCF7GSE15244 30088900 30089265 365 837
TAF HelaGSE8489 30087952 30089413 1461 1237
TAF k562GSE8489 30087763 30089584 1821 1246
USF1 HepG2E 30088862 30089381 519 798
USF2 HepG2E 30088839 30089265 426 868
hScc1 BcellGSE12603 30089450 30090028 578 181
hScc1 CdLSGSE12603 30088971 30089952 981 458
p130 QuiescentGSE19898 30075109 30075261 152 14735
p130 SenescentGSE19898 30089147 30090305 1158 194
p130 shRbQuiescentGSE19898 30089040 30090217 1177 291
p130 shRbSenescentGSE19898 30088989 30090347 1358 252
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 30146274 30146652 378 14778
CTCF CD4SISSRdata 30146274 30146652 378 14778
CTCF G2GSE9613 30138489 30138663 174 6891
CTCF G2GSE9613 30146046 30146612 566 14644
CTCF G2GSE9613 30148910 30149059 149 17299
Myc K562GSE19551 30145686 30146787 1101 14551
Myc hESGSE17917 30146000 30146516 516 14573
Nanog ESGSE20650 30145726 30146392 666 14374
Oct4 ESGSE20650 30145986 30146254 268 14435
USF1 HepG2E 30146471 30146648 177 14874
VDR GM10855-stimGSE22484 30133705 30135487 1782 2911
VDR GM10861-stimGSE22484 30134299 30136163 1864 3546
hScc1 BcellGSE12603 30145930 30146322 392 14441
hScc1 CdLSGSE12603 30145966 30146648 682 14622
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER Fulvestrant-MCF7GSE14664 30099107 30099147 40 0
ER Fulvestrant-MCF7GSE14664 30122337 30122369 32 0
GABP HelaGSE8489 30089917 30092315 2398 0
GABP k562GSE8489 30089882 30092377 2495 0
H3K4me3 colorectalcancer 30090028 30091252 1224 0
H3ac HepG2E 30090055 30092278 2223 0
KLF4 hESGSE17917 30090511 30090675 164 0
Oct1 H2O2-HelaGSE14283 30096043 30096077 34 0
Oct1 H2O2-HelaGSE14283 30102804 30102833 29 0
Oct1 H2O2-HelaGSE14283 30121311 30121340 29 0
Oct1 HelaGSE14283 30090361 30090430 69 0
Oct1 HelaGSE14283 30096041 30096086 45 0
Oct1 HelaGSE14283 30121306 30121339 33 0
PHF8 293TGSE20725 30089153 30090767 1614 0
RARA MCF7GSE15244 30089992 30090407 415 0
RARG MCF7GSE15244 30089992 30091044 1052 0
RUNX JurkatGSE17954 30126783 30126942 159 0
TAF k562GSE8489 30090167 30091909 1742 0
hScc1 CdLSGSE12603 30090241 30090673 432 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
7028 mRNA C13orf22 chr13 30089919 30131686 658 EST chr13 29933547 30090577 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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