Annotation Detail for DDX39
Basic Information Top
| Gene Symbol: | DDX39 ( BAT1,BAT1L,DDXL,MGC18203,MGC8417,URH49 ) |
|---|---|
| Gene Full Name: | DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 |
| Band: | 19p13.12 |
| Quick Links | Entrez ID:10212; OMIM: NA; Uniprot ID:DDX39_HUMAN; ENSEMBL ID: ENSG00000123136; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 13 | Phosphotyrosine(INSR) | HMM predict |
| 13 | Sulfotyrosine | HMM predict |
| 25 | O-linked | HMM predict |
| 265 | Phosphotyrosine(Jak) | HMM predict |
| 327 | Phosphoserine(CK1) | HMM predict |
- RefSeq ID: NM_005804
- Location:chr19 14380630-14391170
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Fos | K562 | GSE19551 | 14390775 | 14391782 | 1007 | 108 |
| LIN9 | S | GSE7516 | 14390995 | 14391585 | 590 | 120 |
| Nanog | hES | GSE18292 | 14395419 | 14395623 | 204 | 4351 |
| PHF8 | Hs68plusFBS | GSE20725 | 14390566 | 14391908 | 1342 | 67 |
| p130 | Quiescent | GSE19898 | 14391281 | 14391767 | 486 | 354 |
| p130 | Senescent | GSE19898 | 14390819 | 14391742 | 923 | 110 |
| p130 | shRbQuiescent | GSE19898 | 14390877 | 14391894 | 1017 | 215 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 14390773 | 14391094 | 321 | 0 |
| H3ac | HepG2 | E | 14390588 | 14390885 | 297 | 0 |
| TAF | k562 | GSE8489 | 14390588 | 14390773 | 185 | 0 |
| hScc1 | Bcell | GSE12603 | 14385022 | 14385443 | 421 | 0 |
| hScc1 | Bcell | GSE12603 | 14390656 | 14391241 | 585 | 0 |
| p130 | Senescent | GSE19898 | 14390051 | 14390267 | 216 | 0 |
| p130 | shRbSenescent | GSE19898 | 14383860 | 14384005 | 145 | 0 |
| p130 | shRbSenescent | GSE19898 | 14389961 | 14390214 | 253 | 0 |
Validated miRNA targets