AutismKB 2.0

Annotation Detail for SSX3


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Basic Information Top
Gene Symbol:SSX3 ( CT5.3,MGC119054,MGC14495 )
Gene Full Name: synovial sarcoma, X breakpoint 3
Band: Xp11.23
Quick LinksEntrez ID:10214; OMIM: 300325; Uniprot ID:SSX3_HUMAN; ENSEMBL ID: ENSG00000165584; HGNC ID: 11337
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
12Phosphothreonine(PKA)HMM predict
12Phosphothreonine(PKC)HMM predict
147Phosphothreonine(PKC)HMM predict
181Phosphoserine(CK2)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_021014
  • Location:chrX 48090806-48101085
  • strand:-
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 48073387 48073900 513 17163
CTCF G2GSE9613 48081121 48081262 141 9615
CTCF G2GSE9613 48089289 48089455 166 1435
NRSF JurkatGSE13047 48090496 48090848 352 135
NRSF JurkatSISSRdata 48090518 48090848 330 124
NRSF mAbJurkat 48071547 48072594 1047 18736
NRSF mAbJurkat 48072944 48074728 1784 16971
NRSF mAbJurkat 48075132 48075451 319 15515
NRSF mAbJurkat 48088751 48089114 363 1874
NRSF-mono JurkatQuESTdata 48090501 48090847 346 133
NRSF-poly JurkatQuESTdata 48072506 48072622 116 18243
NRSF-poly JurkatQuESTdata 48090430 48090728 298 228
hScc1 G2GSE9613 48073353 48073868 515 17196
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
NRSF mAbJurkat 48090587 48092243 1656 0
RARG MCF7GSE15244 48090587 48091028 441 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018