Annotation Detail for MSLN
Basic Information Top
| Gene Symbol: | MSLN ( MPF,SMRP ) |
|---|---|
| Gene Full Name: | mesothelin |
| Band: | 16p13.3 |
| Quick Links | Entrez ID:10232; OMIM: 601051; Uniprot ID:MSLN_HUMAN; ENSEMBL ID: ENSG00000102854; HGNC ID: 7371 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 57 | N-linked (GlcNAc...) (Probable). | |
| 388 | N-linked (GlcNAc...) (Potential). | |
| 496 | N-linked (GlcNAc...) (Potential). | |
| 523 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 57 | N-linked (GlcNAc...) (Probable). | Swiss-Prot 53.0 |
| 388 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 496 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 523 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 606 | GPI-anchor amidated serine (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 57 | N-linked | HMM predict |
| 210 | Phosphoserine(IKK) | HMM predict |
| 234 | Phosphotyrosine(Abl) | HMM predict |
| 234 | Phosphotyrosine(INSR) | HMM predict |
| 238 | O-linked | HMM predict |
| 241 | Phosphoserine(IKK) | HMM predict |
| 280 | Phosphoserine(PKC) | HMM predict |
| 280 | Phosphoserine | HMM predict |
| 280 | Phosphoserine(IKK) | HMM predict |
| 360 | Sulfotyrosine | HMM predict |
| 374 | Phosphotyrosine(Jak) | HMM predict |
| 388 | N-linked | HMM predict |
| 394 | Phosphothreonine(PKC) | HMM predict |
| 453 | Phosphoserine(MAPK) | HMM predict |
| 459 | Phosphoserine(ATM) | HMM predict |
| 459 | O-linked | HMM predict |
| 496 | N-linked | HMM predict |
- RefSeq ID: NM_005823
- Location:chr16 751133-758865
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ER | Breast-Cancer | GSE22609 | 743455 | 743835 | 380 | 7489 |
| ER | MCF7 | GSE19013 | 743286 | 743983 | 697 | 7499 |
| TFAP2C | MCF7 | GSE21234 | 750569 | 751035 | 466 | 332 |
| hScc1 | Bcell | GSE12603 | 750037 | 750375 | 338 | 928 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 752101 | 752819 | 718 | 0 |
| CTCF | G2 | GSE9613 | 754209 | 755531 | 1322 | 0 |
| CTCF | G2 | GSE9613 | 758153 | 758614 | 461 | 0 |
| TFAP2C | MCF7 | GSE21234 | 758583 | 759047 | 464 | 0 |
| hScc1 | Bcell | GSE12603 | 752006 | 752360 | 354 | 0 |
| hScc1 | Bcell | GSE12603 | 754640 | 756227 | 1587 | 0 |
Validated miRNA targets