AutismKB 2.0

Annotation Detail for HNRNPR


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Basic Information Top
Gene Symbol:HNRNPR ( FLJ25714,HNRPR,hnRNP R,hnRNP-R )
Gene Full Name: heterogeneous nuclear ribonucleoprotein R
Band: 1p36.12
Quick LinksEntrez ID:10236; OMIM: 607201; Uniprot ID:HNRPR_HUMAN; ENSEMBL ID: ENSG00000125944; HGNC ID: 5047
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
2N-acetylalanine.
103N6-acetyllysine.
366N6-acetyllysine.
389N6-acetyllysine.
397N6-acetyllysine.
418Nuclear localization signal (Potential).
Location(AA) Modifications Resource
Location(AA) Modification Resource
23Phosphoserine(IKK)HMM predict
89Phosphoserine(CK1)HMM predict
93N-linkedHMM predict
118Phosphoserine(PKC)HMM predict
156Phosphotyrosine(Syk)HMM predict
157O-linkedHMM predict
177Phosphotyrosine(Syk)HMM predict
256N-linkedHMM predict
261N-linkedHMM predict
267Phosphoserine(CK1)HMM predict
431Phosphotyrosine(SRC)HMM predict
431Phosphotyrosine(Syk)HMM predict
431SulfotyrosineHMM predict
434SulfotyrosineHMM predict
435Phosphotyrosine(Syk)HMM predict
435SulfotyrosineHMM predict
449MethylarginineHMM predict
451MethylarginineHMM predict
455MethylarginineHMM predict
458Phosphotyrosine(Abl)HMM predict
470Phosphotyrosine(Syk)HMM predict
471Phosphotyrosine(Syk)HMM predict
486Phosphotyrosine(Syk)HMM predict
486Phosphotyrosine(INSR)HMM predict
490Phosphotyrosine(Syk)HMM predict
493SulfotyrosineHMM predict
497Phosphotyrosine(Syk)HMM predict
500MethylarginineHMM predict
502MethylarginineHMM predict
509MethylarginineHMM predict
516MethylarginineHMM predict
518MethylarginineHMM predict
524MethylarginineHMM predict
526MethylarginineHMM predict
532MethylarginineHMM predict
543MethylarginineHMM predict
546MethylarginineHMM predict
554MethylarginineHMM predict
565MethylarginineHMM predict
578Phosphotyrosine(Abl)HMM predict
578Phosphotyrosine(INSR)HMM predict
588Phosphothreonine(PKA)HMM predict
610Phosphotyrosine(INSR)HMM predict
624SulfotyrosineHMM predict
624Phosphotyrosine(EGFR)HMM predict
624Phosphotyrosine(Syk)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_005826
  • Location:chr1 23508863-23543370
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 23542817 23543990 1173 33
ETS1 JurkatGSE17954 23543155 23543885 730 150
Fos K562GSE19551 23543236 23544602 1366 549
H3ac HepG2E 23544141 23544480 339 940
PHF8 HeLaGSE20725 23542592 23544419 1827 135
Rb GrowingGSE19898 23543701 23544342 641 651
Rb QuiescentGSE19898 23543253 23543579 326 46
Rb shRbSenescenceGSE19898 23543985 23544120 135 682
TAF k562GSE8489 23543883 23544480 597 811
hScc1 BcellGSE12603 23542817 23543990 1173 33
p130 QuiescentGSE19898 23543268 23543479 211 3
p130 QuiescentGSE19898 23543606 23543864 258 365
p130 SenescentGSE19898 23543165 23543599 434 12
p130 SenescentGSE19898 23543710 23544245 535 607
p130 shRbQuiescentGSE19898 23543298 23543742 444 150
p130 shRbQuiescentGSE19898 23543788 23544282 494 665
p130 shRbSenescentGSE19898 23543566 23544156 590 491
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER Fulvestrant-MCF7GSE14664 23520772 23520806 34 0
FOXA1 MCF7GSE15244 23529013 23529307 294 0
FoxA1 MCF7MACSdata 23529001 23529364 363 0
H3K4me2 HCT116GSE10453 23541127 23541867 740 0
H3K4me3 colorectalcancer 23542254 23542748 494 0
H3ac HepG2E 23539243 23540430 1187 0
H3ac HepG2E 23540947 23542748 1801 0
Myc hESGSE17917 23542709 23543338 629 0
Oct1 HelaGSE14283 23520766 23520803 37 0
Oct1 HelaGSE14283 23521023 23521052 29 0
RARA MCF7GSE15244 23529013 23529307 294 0
RARG MCF7GSE15244 23529013 23529307 294 0
RNAII Tamoxifen-MCF7GSE14664 23520765 23520807 42 0
Rb GrowingGSE19898 23543303 23543428 125 0
Rb SenescentGSE19898 23543205 23543506 301 0
TAF k562GSE8489 23538805 23542748 3943 0
TFAP2C MCF7GSE21234 23542633 23543073 440 0
p130 shRbSenescentGSE19898 23543076 23543480 404 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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