AutismKB 2.0

Annotation Detail for CDK9


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:CDK9 ( C-2k,CDC2L4,CTK1,PITALRE,TAK )
Gene Full Name: cyclin-dependent kinase 9
Band: 9q34.11
Quick LinksEntrez ID:1025; OMIM: 603251; Uniprot ID:CDK9_HUMAN; ENSEMBL ID: ENSG00000136807; HGNC ID: 1780
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
185Phosphotyrosine.
186Phosphothreonine.
347Phosphoserine.
350Phosphothreonine.
353Phosphoserine.
Location(AA) Modifications Resource
175PhosphoserinePhospho.ELM 6.0
186Phosphothreonine.Swiss-Prot 53.0
186PhosphothreoninePhospho.ELM 6.0
Location(AA) Modification Resource
41Phosphothreonine(PKA)HMM predict
90Phosphoserine(CDC2)HMM predict
206Phosphotyrosine(EGFR)HMM predict
206Phosphotyrosine(INSR)HMM predict
347Phosphoserine(PKG)HMM predict
347Phosphoserine(CAMK2)HMM predict
347PhosphoserineHMM predict
347Phosphoserine(PKA)HMM predict
364N-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001261
  • Location:chr9 129588157-129592183
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 129584766 129585807 1041 2871
Rb GrowingGSE19898 129587194 129587408 214 857
hScc1 BcellGSE12603 129587083 129587443 360 895
hScc1 CdLSGSE12603 129586834 129587443 609 1019
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ETS1 JurkatGSE17954 129587493 129589170 1677 0
KLF4 hESGSE17917 129588526 129588797 271 0
PHF8 293TGSE20725 129587698 129588977 1279 0
hScc1 BcellGSE12603 129588257 129588745 488 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-1 hsa-mir-1-2 18 19521018
hsa-miR-1 hsa-mir-1-1 20 19521018
hsa-miR-1 hsa-mir-1-2 18 18539123
hsa-miR-1 hsa-mir-1-1 20 18539123
hsa-miR-1 hsa-mir-1-2 18 17234972
hsa-miR-1 hsa-mir-1-1 20 17234972
hsa-miR-133a hsa-mir-133a-1 18 19521018
hsa-miR-133a hsa-mir-133a-2 20 19521018
hsa-miR-133b hsa-mir-133b 6 19521018
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved