Annotation Detail for LANCL1
Basic Information Top
| Gene Symbol: | LANCL1 ( GPR69A,p40 ) |
|---|---|
| Gene Full Name: | LanC lantibiotic synthetase component C-like 1 (bacterial) |
| Band: | 2q34 |
| Quick Links | Entrez ID:10314; OMIM: 604155; Uniprot ID:LANC1_HUMAN; ENSEMBL ID: ENSG00000115365; HGNC ID: 6508 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 2 | N-acetylalanine. | |
| 142 | N6-acetyllysine. | |
| Location(AA) | Modifications | Resource |
|---|
| Location(AA) | Modification | Resource |
|---|---|---|
| 29 | Phosphothreonine(MAPK) | HMM predict |
| 33 | Phosphoserine(ATM) | HMM predict |
| 62 | Phosphotyrosine(INSR) | HMM predict |
| 198 | N-linked | HMM predict |
| 214 | Phosphotyrosine(Syk) | HMM predict |
| 298 | Phosphotyrosine(Jak) | HMM predict |
| 368 | Phosphothreonine(MAPK) | HMM predict |
| 395 | Proline | HMM predict |
- RefSeq ID: NM_006055
- Location:chr2 211004220-211049675
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Fos | K562 | GSE19551 | 211049615 | 211049908 | 293 | 86 |
| P300 | T0-glioblastoma | GSE21026 | 211049323 | 211051181 | 1858 | 577 |
| Rb | Quiescent | GSE19898 | 211049555 | 211049848 | 293 | 26 |
| p130 | shRbSenescent | GSE19898 | 211049465 | 211049932 | 467 | 23 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 211018168 | 211018450 | 282 | 0 |
| CTCF | CD4 | SISSRdata | 211018168 | 211018450 | 282 | 0 |
| CTCF | G2 | GSE9613 | 211049402 | 211049787 | 385 | 0 |
| PHF8 | 293T | GSE20725 | 211049165 | 211050082 | 917 | 0 |
| Rb | Senescent | GSE19898 | 211049463 | 211049812 | 349 | 0 |
| hScc1 | Bcell | GSE12603 | 211049402 | 211049787 | 385 | 0 |
| p130 | Quiescent | GSE19898 | 211049433 | 211049890 | 457 | 0 |
| p130 | shRbQuiescent | GSE19898 | 211049349 | 211049735 | 386 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15589 | EST | chr2 | 211118340 | 211151112 | 29631 | mRNA | LANCL1 | chr2 | 211121481 | 211166937 | Non-exonic Bidirectional (NOB) pairs | |